Bubalus bubalis (water buffalo): 102405661
Help
Entry
102405661 CDS
T05912
Symbol
LSM6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03018
RNA degradation
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102405661 (LSM6)
09123 Folding, sorting and degradation
03018 RNA degradation
102405661 (LSM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102405661 (LSM6)
03041 Spliceosome [BR:
bbub03041
]
102405661 (LSM6)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102405661 (LSM6)
mRNA degradation factors
5'-3' decay
Lsm complex
102405661 (LSM6)
Spliceosome [BR:
bbub03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102405661 (LSM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
102405661
NCBI-ProteinID:
XP_045019105
LinkDB
All DBs
Position
17:60222699..60237822
Genome browser
AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcggaagcaaacacccagtgacttcctgaagcaaatcattgggcgaccagtt
gtggtgaaattaaattcgggagtggattatcgaggggtcctggcttgcctggatggctac
atgaatatagccttggagcagacagaggagtatgtaaatggacagctgaagaataagtac
ggggatgcatttatccgaggaaacaatgtgttgtatataagtacacagaagaggaggatg
tga
DBGET
integrated database retrieval system
