Bubalus bubalis (water buffalo): 102405903
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Entry
102405903 CDS
T05912
Symbol
SLX1A
Name
(RefSeq) structure-specific endonuclease subunit SLX1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
102405903 (SLX1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102405903 (SLX1A)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102405903 (SLX1A)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
102405903
NCBI-ProteinID:
XP_006070570
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All DBs
Position
24:16154403..16157495
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AA seq
267 aa
AA seq
DB search
MGAGCFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGRGPWEMVL
IVHGFPSAVAALRFEWAWQHPQASRRLTHVGRRLRGEATFAFHLRVLAHMLRSPPWVRLP
LTLRWLRADFRQDLCPPPPPHMPLAFGPPPPRAPPPRSQAGPSDDMGCEPQQDVDACCTL
CARALQDEESPLCCPHPGCSLRAHVICLAEEFLQEEPGQLLPLEGACPGCKNSLLWGDLI
WLCRMGTEEDEEDSELEEEHWTDMLKT
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccggatgcttcttcggcgtctacctgctctactgtctgaacccacggcaccgg
ggccgcgtctacgtggggttcaccgtcaaccctgcgcgtcgagtgcagcagcacaacggg
ggccgcaaaaaaggcggggcctggcggaccagtgggcgcgggccgtgggagatggtgctc
atcgtacacggcttcccctctgcagtggccgcccttaggttcgagtgggcctggcaacac
ccacaggcctcgcgccgcttgacgcacgtgggtcggcgcctgcgcggagaggccaccttc
gccttccacctgcgcgtcctggcgcacatgctgcgctcgccgccctgggtgcgccttccg
ctcaccctgcgctggctgcgcgctgacttccgccaggacctctgcccaccgccgccgcct
cacatgccactggccttcgggcctccgccaccccgggccccacccccgagaagccaagca
ggtccttccgacgacatgggatgcgagccgcagcaagacgtcgacgcctgctgcaccctg
tgcgcacgcgcgctccaggatgaagagagccccctatgttgcccgcaccctggctgctcc
ctaagggcccatgtgatctgcctggcagaggagttcctgcaggaggaaccagggcagctc
ctgcctctagagggcgcatgccctggctgtaagaactcactgctgtggggagacctgatc
tggctgtgccggatgggcactgaggaggacgaggaggactcagaattagaagaggagcac
tggactgacatgctcaagacctga
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