Bubalus bubalis (water buffalo): 102406075
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Entry
102406075 CDS
T05912
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X4
KO
K16498
protocadherin delta 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102406075 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbub01009
]
102406075 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102406075 (PCDH7)
Protein phosphatases and associated proteins [BR:
bbub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102406075 (PCDH7)
Cell adhesion molecules [BR:
bbub04515
]
Cadherins
Protocadherins
102406075 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
TMEM154
Cadherin_pro
LYRIC
KIAA1549
MLANA
EphA2_TM
Adeno_E3_CR2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
102406075
NCBI-ProteinID:
XP_025145992
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All DBs
Position
7:complement(66868887..67346709)
Genome browser
AA seq
1249 aa
AA seq
DB search
MLRMRTMGWARAWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGGGEGRRAGPADSAPYPGGGGNGGSGSGPGGSKRRLDAPEAGGGTSPG
GRSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLI
TDVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLL
RLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIR
KIGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEG
DQNKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFGQS
VVEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVNTMLD
REQTDRYEFKVNARDKGVPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPV
GMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGG
DPPRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINAD
LNYSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVF
VNESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIV
VMARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASK
PNGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKH
QAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGS
LQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVDSRPLPDVALTGKCTR
ECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDRNRNLLN
KKLTSSYETFSAASFSKNEDANTEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggaccatgggatgggcgcgcgcctggtgtctgggctgctgtctcctc
ttgccgctctcgctcagcctagcggccgccaagcaactcctccggtaccgactggccgag
gagggcccagcagacgtccgcatcggcaacgtcgcctcggacttgggcatcgtgaccggc
tccggtgaggtgactttcagcctcgagtcgggctcagagtacctgaagatcgacaatctc
accggcgagctgagtacgagcgagcggcgcattgaccgcgagaaactgccccagtgtcag
atgatcttcgacgaaaacgagtgcttcttggacttcgaggtctcggtgatcgggccctcg
cagagctgggtggacctgttcgagggtcgggtcatcgtgctcgacatcaacgacaacacg
cccaccttcccgtcacccgtgctcacgctcacggtggaggagaaccggccggtgggcact
ctatacctgctgcccaccgccaccgaccgcgacttcggccgcaacggcattgagcgctac
gagctgctacaggagcccgggggcggcggcggcggcggcggcggcgagggccggcgcgcc
gggcctgccgacagcgccccctaccccgggggcggcgggaacggcgggagcggcagcggc
cccgggggctctaagaggaggctggacgcgccagaagccggcggcgggaccagcccgggc
ggacgcagcagcgtgttcgaactgcaggtggccgacaccccggatggcgaaaagcagccg
caactgatcgtgaagggggcgctggaccgcgaacagcgcgactcctacgaactgaccctg
agggtgcgcgacggtggcgacccgcctcgctcctctcaggccatcctgcgggtgctcatc
accgacgtgaacgacaacagcccccgcttcgagaagagcgtgtatgaggctgacctggcc
gagaacagcgccccggggacccctatcctgcagctgcgtgccgccgacctggacgtgggg
gtcaacgggcagattgaatacgtgttcggggcggctaccgagtccgtgcggcggctgctg
cgcctagacgagacgtccggctggctcagtgtcctgcaccgtatagaccgcgaggaagtg
aatcagctgcgcttcacggtcatggcccgcgatcgcgggcagcctcccaagacagacaaa
gccacggtggtccttaatatcaaggacgagaacgataatgtgccgtccattgaaatccgc
aagatcgggcgtatcccactcaaggacggggtggccaacgtggccgaggacgttctggtg
gacacccccatcgccctggtacaggtgtctgaccgagaccaaggcgagaatggagtggtc
acctgcaccgtggtgggcgacgtgcccttccagctcaagccggccagtgacacagagggc
gaccagaacaagaaaaagtacttcctgcacacctcggcccctttggactatgagaccacc
agggagttcaacgtggtcatagtagcggtggactcgggcagccccagtctctccagcaac
aactccctgattgtcaaggtgggagacaccaatgacaacccgcctgtctttggccagtca
gtggtggaggtgtactttcctgagaacaacatccccggagagagggtagccacggtgctg
gctacagacgcggacagtgggaaaaacgctgaaatcgcctactcgctggactcttccgtg
atggggatctttgccatcgatcccgattctggggacatcctcgtcaataccatgctggac
cgcgagcagactgacaggtacgagtttaaagttaacgccagagacaaaggcgtccccgtg
ctacagggcagcaccacagtgattgttcaggtggctgacaagaatgacaatgaccctaag
ttcatgcaggacgtctttactttttatgtgaaagaaaatttacagcccaacagccccgtg
ggaatggtcacagtgatggatgctgacaaggggcgcaatgcagagatgagcctatacata
gaggagaacagtaacattttttccattgaaaatgacacggggactatttactccacgatg
tcttttgacagagaacatcagaccacatacactttcagagtcaaagctgtggatggggga
gatccccccagatctgcaacagccactgtctctctctttgtgatggatgagaatgacaat
gctcccactgtcacccttcccagaaatatttcctacactttactgccaccttcaagtaac
gtcaggacagtagtagctacggtgttggcaacagacagtgatgatggcatcaatgcagac
cttaactacagcattgtgggagggaatcccttcaagctgtttgagattgattccaccagt
ggtgtggtttccttagtgggaaaactcacccaaaagcattatggcttgcacaggttggtg
gtgcaagtgaatgacagtgggcagccttcccagtctaccacgactctggtgcatgtgttt
gtcaatgaaagtgtttctaatgcaactgtgattgactcccagatagccagaagcttgcac
accccactcacccaggatatagctggtgacccaagctatgaaattagcaaacagagactc
agtattgtcattggggtggttgctggaattatgactgtgattctaatcatcttaattgta
gtgatggcaagatactgccggtcgaaaaataaaaatggctatgaagccggcaaaaaagat
catgaagatttttttacaccccaacagcatgacaaatctaaaaaacctaaaaaggacaag
aaaaacaaaaaatctaagcagccactctacagcagcattgtcactgtagaagcttctaaa
ccaaatggacagaggtatgatagtgtcaatgagaagctgtcagacagcccaagcatgggc
cgataccgatcagttaatggtgggcctggcagtcctgacctggccaggcattacaaatct
agttcccccttgcctactgtccagcttcacccccagtcaccaactgcaggaaaaaaacac
caggccgtacaagatctaccaccagccaatacatttgtgggagcaggagacaacatttca
attggatcagatcactgctctgagtacagctgtcaaaccaataacaaatacagcaaacag
ccatttcgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtca
ctgcagagttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttca
tcagggccaagactgggtgcccttccactcccagaggacaactatgaaaggaccacgccg
gatggcagtgttgattcaagacctcttccagatgtagccctgactgggaagtgtacccgt
gagtgtgatgagtacggccattccgactcctgctggatgcctgtccgcacttctccagag
aggaagaagagccagcccaaactctccactttcatgcctgttgatgaacgaggaagccag
gaaaagctggctaatggtgaggccgccatcatgggcgaccgcaacagaaacctcctgaac
aaaaagttgacctcatcctatgagaccttcagtgcggctagtttcagcaaaaatgaggat
gccaacactgaggatattccccttacaaaaacaggggaatacaagccatctcctgtcaat
actctcactagaagagaagtttacctgtag
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