Bubalus bubalis (water buffalo): 102406086
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Entry
102406086 CDS
T05912
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102406086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102406086
03012 Translation factors [BR:
bbub03012
]
102406086
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102406086
Translation factors [BR:
bbub03012
]
Eukaryotic type
Release factors
102406086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
LPD34
Motif
Other DBs
NCBI-GeneID:
102406086
NCBI-ProteinID:
XP_006065071
LinkDB
All DBs
Position
X:complement(131912148..131915008)
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AA seq
639 aa
AA seq
DB search
MDLGSSSSSSSSDSAPDCWDQVDMEAPGLALSGDRAFLALAAAAAEVQHEPLSSAFSRQL
NINAKPFVRNVHAAEFVPAFLRGPSQPQTHPPNDVPGFYETCTGAGDPQGKRLGRGGGGA
PVEHSKEEQLLWREGSNSAVTMELSEPVVENGEVEMVLEDSWEHNKEVSEAEPGGSSLGD
SGPPEESGQEMMEKEEIRKSKSVVVPSGAPKKEHANLVFIGHVNAGKSTIGGQIMFLTGM
VDKRTLEKYEREAKEKNRESWYLSWALDTNQEERDKGKTVEVGRAYFETEKKRFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTKEHAMLAKTAGVKYLIVLIN
KMDDPTVNWSVERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYT
GLPFIPYLDNMPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHN
VEVLGIFSDDAETDYVVPGENLKIRLKGIEEEEILPGFILCDPTNLCHSGRTFDVQIVII
EHKSIICPGYNAVLHIHTCTEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDLPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1921 nt
NT seq
+upstream
nt +downstream
nt
atggatctgggcagcagcagcagcagcagcagcagcgactcggctcccgactgctgggac
caggtggacatggaagcaccgggtttggccctgagcggggacagagccttcttggcgttg
gcggcggctgccgccgaggtgcagcatgagcccctcagctcggcctttagccgtcagctc
aacatcaatgccaaacccttcgtgcgtaacgtccatgctgcggagttcgtgccggccttc
ctgcggggcccgagccagccgcagacccaccccccaaatgacgtccccggattctatgaa
acctgtacgggcgcgggcgaccctcaaggtaaaaggctgggacgtggagggggggggggc
acctgtggaacattccaaagaggaacagttattgtggcgtgaaggttccaattcagccgt
taccatggaactctcagaacctgttgtagaaaatggagaggtggagatggttttagaaga
ctcatgggagcacaataaagaagtaagtgaagccgagccagggggtagttctttgggaga
ttcggggcccccagaagaaagtggccaggaaatgatggagaaagaggaaatcagaaaatc
gaaatctgtggttgtaccctcaggtgctcctaaaaaagaacatgcaaatttggtattcat
tgggcatgtcaatgctgggaagtcaaccattggaggacagatcatgtttttgacaggaat
ggttgacaaaagaacacttgagaaatatgaaagagaagctaaagaaaaaaatagagaaag
ttggtatttgtcctgggccttagatacaaaccaggaagaacgagacaagggtaaaacagt
agaagtgggtcgtgcctattttgaaacagaaaagaaacgtttcacgattttagatgcccc
tggccataagagttttgtcccaaatatgatcggtggtgcttctcaagctgatttggctgt
actggtaatctctgccaggaaaggagagtttgagactggatttgaaaaaggtggacagac
aaaagaacatgcaatgttggcaaaaacggcaggggtgaaatatttgatagtgcttattaa
taagatggatgatcccacagtaaattggagcgttgagagatatgaagaatgtaaagaaaa
gctagtgccctttttgaaaaaagtcgggtttagtcccaaaaaggacattcactttatgcc
ctgctcagggctgactggggcaaatattaaagagcaatcagatttctgcccttggtacac
cggattaccattcattccctatttggataatatgccaaacttcaacagatccattgatgg
accaattagactgccaattgtggataagtacaaggatatgggcactgtggtcctgggaaa
gctggaatcaggatccatttttaaaggccagcagcttgtgatgatgccaaacaagcacaa
tgtggaagttcttggaatattttctgatgatgctgaaactgactatgtagtcccaggtga
aaaccttaaaatcagactgaaggggattgaagaagaagagattcttccgggattcatact
ctgtgatcctactaatctttgccattctggacgcacatttgatgttcagatagtgattat
tgagcacaaatccatcatctgcccaggttataatgcagtgctgcacattcatacttgtac
tgaggaagttgagataacagccttaatctccttggtagataaaaaatcaggagaaaagag
taagacacggccccgcttcgtgaagcaagatcaagtgtgcatcgcccgtttaaggacagc
aggaactatctgccttgagacattcaaagatttgcctcagatgggtcgttttactttaag
agatgagggtaagaccattgcaattggcaaagttctgaaactggtcccagagaaggacta
a
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