Bubalus bubalis (water buffalo): 102406094
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Entry
102406094 CDS
T05912
Symbol
RRP9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X2
KO
K14793
ribosomal RNA-processing protein 9
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbub03009
]
102406094 (RRP9)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
90S particles
Other 90S particles
102406094 (RRP9)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
WDR54
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
102406094
NCBI-ProteinID:
XP_044789895
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All DBs
Position
21:48903046..48910973
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AA seq
470 aa
AA seq
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MSATGPAGKRGKPASGAGAGAEALKRRRKGDSFGDKVKSKGGGKMNEEISSDSESESLAP
RRTEEEEEEELEETAQEKKLRLAKVYLEQLRQQEEEKAEAREFEEDQVAGRLKEDVLEQR
GRLQKSVAKEIQAPDPADIRILRGHQLSITCLVVTPDDLAIFSAAKDCTIIKWSVESGRK
LHVIPRAKKGAEGQPPGHSTHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGH
RDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTA
GGRDGTVRVWKIPEESQLVFYGHQGSIDSIQLINEEHMVSGADDGSVALWGLSKKRPLAL
QREAHGLRGEPGLEQPFWVSSVAALLNTDLVATGSHNNSLRLWQCGEGFRQLDLLYDIPL
AWPVVADQRGQELCLHHPSPQGPQAPGCWLLTLTSPLFKFSPGHPLLSLY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgacagggccggctggtaagaggggaaagccggcctcaggggccggggctggt
gcggaggccttgaagcggcggcgaaagggcgactcctttggggacaaggtcaagtccaag
ggtggcggcaagatgaatgaggagatctcgagcgactcggagagtgagagtctagctccc
aggaggactgaggaggaggaggaagaggagctggaggagaccgcacaggagaagaagctg
cgcttggccaaggtctacctggagcagctcaggcagcaagaggaggagaaggctgaggcc
cgcgaatttgaggaggaccaggtggcagggaggctgaaggaggatgtgctcgagcagagg
ggcaggctgcagaagtcagtggcaaaggagatccaggccccagacccggctgacattcga
atcttacgtggccaccagctgtctatcacatgtttggttgtcacccctgacgacctggcc
atcttttctgctgctaaagactgcaccattattaagtggagcgtggagagtggacggaaa
cttcatgtgatccctcgagccaagaagggcgccgaggggcaaccccctggccacagcacc
catgtcctctgcatggccatctcttccgatggcaagtacttggcttcaggcgaccgcagc
aagctcattctcatttgggaggcccagagctgccagcacctgtacaccttcacgggacac
cgggacgctgtgtcggggctggcgttccgcagaggcacccaccagctctacagcacatcc
catgaccgctctgtgaaggtgtggaatgtggcagagaactcctatgtggagacgctcttc
gggcaccaggacgctgtggctgcactggatgctctgagcagggagtgctgtgtgaccgct
gggggccgggacgggaccgtgcgtgtgtggaagatccccgaggagtcccagcttgtcttc
tatggccaccagggctccatcgacagcatccagctcatcaatgaggagcacatggtgtcg
ggtgcagacgacggttccgtggccctgtggggcctctccaagaagcggccacttgccctg
cagcgtgaggcccatgggctgcggggggagccaggcttggagcagcccttctgggtgtcg
tcagtcgcagccctgctcaacacagaccttgtggccacaggctcccacaacaattctctg
cggctctggcaatgtggagagggcttccggcagcttgaccttctctacgacatccccctg
gcttggccggtggtggcggatcaaagaggccaggaactctgtctgcatcatccctctccg
cagggcccccaggcccccggctgctggctcctgacactcacatcccctttatttaagttc
tccccaggtcatcccctgctttctttgtattaa
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