Bubalus bubalis (water buffalo): 102406182
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Entry
102406182 CDS
T05912
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
bbub03040
Spliceosome
bbub05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102406182 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
102406182 (NCBP1)
03015 mRNA surveillance pathway
102406182 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102406182 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102406182 (NCBP1)
03041 Spliceosome [BR:
bbub03041
]
102406182 (NCBP1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
102406182 (NCBP1)
Spliceosome [BR:
bbub03041
]
Common components
Common spliceosomal components
Cap binding complex
102406182 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
102406182
NCBI-ProteinID:
XP_006063524
LinkDB
All DBs
Position
3:124675074..124712297
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKSNN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFASTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDFVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgagaacgatgggggacaacctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcacttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggtgttttggaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgaccatttatacaacattagttggactactgaatgccaggaattacaacttt
ggtggagaatttgtagaagccatgattcgccaactgaaagaatcattgaaatcaaacaat
tataatgaagctgtatatttggtccgttttctatctgatcttgtgaactgtcatgtcatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtgcctcaggtgcggcgggattggtacgtgtatgcgtttctgtcgtccttgccctgggtt
ggaaaggaattgtatgaaaagaaagatgcagagatggaccgaatctttgccagcactgaa
agctatcttaaaagacgccaaaagactcatgtacccatgttacaagtatggactgcagag
aaaccacatccgcaagaagagtatttagattgcctctgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagccctgcagcacaacctgcctccgttcacaccgccgcctcacactgaagactcg
gtgtacccgatgccgagggtcatcttcagaatgtttgattacacagatgatcctgagggt
cctgtaatgccagggagtcattcagtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccattggaaggaaaggaagacttgtgctgcacagctggtgagttatcct
gggaagaacaagatccccttgaactaccacatagttgaggtgatctttgcagagctgttt
caacttccggcaccacctcatatcgatgtgatgtacacgacacttctcattgaactgtgc
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatatatg
cgtttggacacgatgaatactacatgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccaattccgttggagctgggaagattggtcagattgtcttactcaagat
ccagaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagattttgtccctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaactctcttcctggacattcagtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagacgtccctaatcctaatcaagatgatgatgatgatgaaggattcagctttaac
ccactgaaaatagaagtctttgtacagactctgctacacttagcagccaagtcattcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaaattacatgttctaagagtcatgtttgaggtctggcggaaccatccacagatg
attgctgttctagtggataagatgattcgtacacagattgttgactgtgctgcagtagca
aactggatcttctcttcagaattatctcgtgactttactagattgtttgtttgggaaatc
ttgcactccacaattcgcaagatgaacaaacacgttctgaagatccagaaagagctagaa
gaggctaaagaaaaactcgcaaggcaacacaaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaagaacaaatagaaagactgcaggaaaaagtggaa
tctgctcagagtgaacaaaagaatctcttccttgtcatatttcagcgttttatcatgatc
ctgactgagcacttagtacgctgtgaaactgacgggaccagtgtgttaacaccatggtat
aagaactgtatagagaggctccaacagatcttcctacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcactgctgagttagaccctcacatcctggct
gtgttccagcagttctgtgccctgcaggcctaa
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