Bubalus bubalis (water buffalo): 102406234
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Entry
102406234 CDS
T05912
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102406234 (DDX4)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102406234 (DDX4)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102406234 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102406234
NCBI-ProteinID:
XP_025126217
LinkDB
All DBs
Position
19:complement(23162320..23231234)
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AA seq
683 aa
AA seq
DB search
MGDEDWEAEIIKPHISSYVPVFEKDRYSSGANGDTFNRTPASSSDPGESNKRENTSTVGG
FGVGKSFGNRGFSNNKFEEGDSSGFWRGYQDGNDSEASGSSRRGGRGSFRGCRGGFGRGS
PNSDYEQDEGTQRSGGIFGSRRSALSGAGNGDTFQSRSGSRSGRGGYKGLNEEVITGSGK
NSWKSEAEGGESGDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDPP
PAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLL
PILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVTYGGTQ
LGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLI
SCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKANYLFVAVGQVGGACRDVQQTILQVGQ
YSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALG
DFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFF
DLESDSQLAQPLVKVLSDAQQDVPAWLEEIAFSTYGPGFSGNARGNVFASVDTRKNYHGK
SSLNTAGFSSSPAPNPVDDESWD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaagcagaaataatcaaacctcatatatcttcctatgttcct
gtatttgagaaggataggtattcttctggagcaaatggagacacttttaacaggactccg
gcttcatcgtcagatcctggtgagtctaataaaagagagaatacgtccacagtgggtggt
tttggagttggaaagagttttggaaacagaggtttttcaaataacaagtttgaagaaggt
gatagctctggtttctggagaggttatcaagacggaaatgattcagaagcttcaggatcg
tccagaagaggtggaagaggtagtttccgaggttgccgtggaggatttggtcgaggaagt
ccaaatagcgattatgaacaagatgaggggacccagcgctctggtggcatttttggttct
agaagatcagcattaagtggtgcaggtaatggtgacactttccaaagcagaagtggtagt
agaagtggacgaggtggttacaaaggtttaaatgaagaagtaattacaggctctggaaag
aattcttggaagtcagaagctgaaggaggagaaagtggtgacactcaaggaccaaaagtg
acctacataccacctcctccacctgaagatgaggactccatctttgcacattatcaaaca
ggcataaactttgacaaatatgatactattcttgtagaagtatctggacatgatccacca
ccagcaattctgacttttgaagaagctaatctttgtcagacactgaataacaacattgct
aaagctggttatactaagcttactcctgtgcaaaaatacagtattcctattatacaagga
ggacgagatttgatggcttgtgctcagacaggctctggaaagactgcagcttttctcttg
ccaattttggctcatatgatgcgtgatggaataactgccagtcgttttaaagaactgcag
gaaccagagtgtattattgtagcaccaactcgagagttgatcaatcagatctatttggaa
gccagaaaattttcttttgggacttgtgtaagagcagttgtcacatacgggggaacccag
ttggggcactcaattcgacaaatagtacaaggctgtaatatattatgtgctactcctggg
agactgatggatatcatcggcaaagaaaagattggtctcagacaagtcaaatacttagtt
ttggatgaagctgatcgcatgctggatatgggttttggaccagagatgaaaaagttaatt
tcctgcccaggaatgccatcaaaggaacagcgtcagacccttatgttcagtgcaactttt
ccagaagaaattcaaaggttggctggggagtttttaaaggcgaattatttgtttgttgct
gttggacaagtgggtggagcatgtagagatgttcagcagaccattcttcaagttggccag
tactcaaaaagagaaaaacttgttgaaattctacgaaacataggtgatgaaagaactatg
gtctttgttgaaactaagaaaaaagcagattttattgccacttttctttgtcaagaaaaa
atatcaacaacaagtattcatggtgatcgtgaacagagagaaagagagcaagctcttgga
gatttccgctgtggaaagtgccccgttcttgttgctacttcagtagctgcccgagggctg
gatattgaaaatgttcagcatgttattaattttgatcttccttctaccattgatgaatat
gttcatcgaattgggcgtactggtcgttgtggaaatactggcagagctatttcctttttt
gatctggaatcagatagccagttagcacagcctctagtgaaagtgctatcagatgctcaa
caggatgttcctgcatggttagaagaaattgcctttagtacatatggtcctggcttcagt
ggtaatgcaagaggaaatgtgtttgcatcagtcgatactagaaagaattaccacggcaag
agctctttgaacacagcagggttttcttcatcaccagctcctaatccagtagatgatgag
tcatgggattaa
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