Bubalus bubalis (water buffalo): 102406329
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Entry
102406329 CDS
T05912
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X2
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbub04121
]
102406329 (RBBP6)
Enzymes [BR:
bbub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102406329 (RBBP6)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
U-box type E3
102406329 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
102406329
NCBI-ProteinID:
XP_006071221
LinkDB
All DBs
Position
24:complement(20014242..20048636)
Genome browser
AA seq
1763 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSSTHPAPSMSSLTSNQSSLAPPVPGNPSSAPAPVPDITATVSISV
HSEKSDGPFRDSDNKILPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLL
HGQLIPTTGPVRINAARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSE
RSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPGVPPPQFSPQFPPGQPPPAGYSVPP
PGFPPAPTNLSAPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEESKSPYSGSSY
SRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHR
SRSRSPPYRRYHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRFREVPPPYDMKAYYGRS
VDFRDPFEKERYREWERKYREWYEKYYKGFATGAQPRPSANRENFSPERFLPLNLRNSPF
TRGRREDYSGGQSHRSRNVGGNYPEKLSSRDSHNQKDNTKSKDKEGENAPGDGKGNKHKK
HRKRRKGEESEGFLNPELLDTSRKSREPTSGEENKTDSLFVLPSRDDATPVRDEPMDAES
ITFKSVSEKDKREKDKPKAKGDKTKRKNDGSTVSKKETVVKPAKGPQEKLDGEREKSPRS
EPPLKKAKEETPKTDNVKSSSSSQKDEKTVGTPRKAHSKSVKEHQETKPVKEEKVKKDYS
KDIKSEKVTSKEEKARKPNEKSKPLDSKGEKRKRKTEEKSVDKDFESSSMKISKLEVTEI
VKPSPKRKMELDIEKMDRTPEKDKISSSAAPAKKIKLNRETGKKIGSTENVSNTKEPSEK
LESTSSKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIK
TMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTSQPISSVGKPASIIKNVS
TKPPNAIKYTEKESESSEKIQKLAKEVSHEIAQHEVKSSKNSASSEKGKTKDRDHSVLEK
ENPEKRKNSSTQPEKDSNLGRLSEQGDFKGLPQSSKETRTSGKEDKHDSIRGSSNKDFTP
NRDKKADYDNREYSSSKRRDERNELTRRKDSPPRSKDSASGQKTKPREERELPKKGTGDS
KKSNSSPTRDKKPHDHKATYDTKRLSEETKSVDKNPCKDREKHMLEAKNNKESSGNKSLS
ILNPPEAQIEKEQVTGQIDKNTIKPKPQLSHSSRLSSDLTRETDEAAFEPDYNESDSESN
VSIKEEETAGKVSKELKDKVVEKAKESLDTAAVSQAGVTRSQSQSSPSVSPSRSHSPSGS
QTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEAELEKSQKHKHKKKK
SKKSKDKEKEKEKDDQKVKSVTV
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcttctaaactcaactatgataccgtcacctttgat
gggctccacatctccctctgcgacttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcaccaacgcacagacgaaagaagaatatactgatgat
aatgctctaattcctaaaaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccgatcaattacatgaagaaacctttaggtccaccacctccatcttatact
tgtttccgttgtggtaaacctggccattatattaagaattgcccaacaaatggggataag
aactttgaatctggtcctaggattaaaaagagcactggaattcccagaagttttatgatg
gaagtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaaatatgccata
ccaactatagatgcagaggcatatgcaattgggaagaaagaaaaaccaccttttttgcca
gaagaaccatcatcatcttcagaagaagatgatcctatcccagatgagttgttgtgtctc
atctgcaaagatattatgactgatgctgttgtcattccctgctgtggaaacagttactgt
gatgaatgtataaggacagcactcttggaatcagatgaacatacatgtccaacatgtcat
cagaatgacgtctctcctgacgctttaattgccaataagttcttacgacaggctgttaat
aacttcaaaaatgaaactggttatacgaaaagactaagaaaacagttacccccaccccct
cccccaataccacctccaagaccactcatccagcggaacctacagcctctgatgagatct
ccaatatcaagacagcaagatcctctgatgattccagtgacatcttcatcaactcacccg
gctccatctatgtcttcactaacctctaatcagtcttctttggcccctcctgtccctgga
aatccatcttctgccccagcccccgtacctgatataactgcaacagtctccatatcagtc
cactcagaaaaatcagatggaccttttcgggattcagataataaaatactgccagctgca
gcacttgcatcagaacattcaaagggagcttcttcaattgcaattactgctcttatggaa
gagaagggttaccaggtgcctgtacttggaaccccctctttgcttggacagtcattattg
catggacaattgatccccacaactggtccagtaagaataaatgctgctcgtccaggtggt
ggtcgaccaggttgggaacattccaacaaacttggatacttggtttctccaccacagcaa
attagaagaggagagagaagctgctacagaagtataaaccgtggacgacaccacagcgaa
agatcacagagaactcaaggcccgtcactgccagcgactccagtgtttgttcctgtccca
ccccctcccttgtatccgcctcctccccacacacttcctctcccaggtgttcctccacca
cagttctctcctcagtttcctcctggccagccaccacctgctgggtatagtgttccccct
ccagggtttcctccagctccaaccaatttatccgcaccttgggtgtcatctggagtacag
actgctcattctaataccatcccaacaacacaagcaccacctttgtccagggaagaattc
tatagagagcaacgacgactaaaagaagagtccaagtctccctatagtggttcatcctat
tcaagaagttcatatacttattctaaatcaagatctggttcaacacggtcacgttcttat
tctcgatcatttagccgctcacattctcgttcctattcacgatcacctccgtaccccaga
agaggacgaggaaagagtcgaaattaccgttcacggtctagatcgcacgggtatcatcga
tctaggtcaaggtcacctccatatagacggtatcactcacgatcaagatctcctcaagca
tttaggggacagtctcctaataaacgtaatgtacctcaaggagaaacagagcgtgaatat
tttaacagattcagagaagttccaccaccttatgacatgaaagcttattatgggaggagt
gttgactttagagacccatttgagaaagaacgttatcgagaatgggagagaaaatatcga
gagtggtatgaaaaatattacaaaggctttgctactggagcacagcctagaccatcagca
aatagagagaacttttctccagaaagatttttaccacttaaccttaggaattctcccttc
acaagaggccgcagagaggattactctggtggacagagtcatagaagtcgaaatgtaggt
ggcaactatccagaaaagctttcatcgagagacagtcacaatcagaaggataatacaaag
tcaaaagacaaggaaggtgaaaatgctccaggagatggtaaaggaaataaacataagaaa
catcgaaaaagaagaaagggggaagaaagtgaaggctttctgaacccagagttattagac
acttctaggaaatcaagagagcctacaagtggtgaggaaaataaaacagactcattgttt
gttctcccaagtagagatgatgctacacctgttagagacgaaccaatggatgctgaatcc
attacttttaaatcagtgtctgaaaaagacaagagagaaaaagataaacctaaagcaaaa
ggtgacaagaccaaacggaaaaatgatggatctactgtatccaaaaaagaaactgttgta
aaacctgctaaaggaccccaagaaaaactagatggagagcgtgaaaaatctcctcgatct
gaacctccacttaaaaaagccaaagaggagaccccgaagactgacaatgtgaaatcatcg
tcttcctctcaaaaagatgaaaagacggttggtacccccagaaaagctcactcaaagtca
gtaaaggagcaccaggagacaaaaccagtcaaagaggaaaaagtgaagaaggactactcc
aaagacatcaagtcagagaaggtaactagtaaggaagaaaaggccaggaagcctaatgag
aaaagtaaaccacttgatagcaagggagaaaaaaggaagagaaaaactgaagaaaaaagt
gtagataaagattttgagtcatcttcaatgaaaatctctaaattagaagtaactgaaata
gtgaaaccatcacccaagcgcaaaatggagcttgatattgaaaagatggataggacacct
gaaaaagacaaaatttcatcatcagctgctccagccaaaaaaatcaagcttaacagagaa
acgggtaaaaaaattggaagtacagaaaatgtatctaacacaaaagaaccctctgaaaaa
ttggaatcaacatccagcaaagtgaaacaagaaaaagtcaaaggaaaggtcaggcggaaa
gtgactggaactgaaggatccagctcaacacttgtggattataccagtaccagttcgact
ggaggcagtcctgtgcggaaatctgaagaaaaaacagatacaaagcgaactgtcattaaa
acaatggaagaatataataatgacaacacagctcctgctgaagatgttattattatgatc
caggttccccaatccaaatgggataaagatgactttgaatctgaagaagaagatgttaaa
tccacctcacagcctatatcaagtgtaggaaaacctgccagtattataaaaaatgttagc
actaaaccaccaaatgcaatcaagtatactgaaaaagaaagtgaatcatcagagaaaatt
cagaaactcgccaaggaagtgagccatgaaattgcacagcatgaggtcaaaagttcaaaa
aactctgcgtctagtgaaaaagggaaaaccaaagatcgagatcactcagtactggaaaag
gaaaacccagaaaagagaaagaacagcagcactcagccagagaaagatagtaatctgggc
cgtctgagtgagcaaggagattttaaaggtctgcctcagtcttccaaagagactagaact
tctgggaaagaagataagcatgattccattcgagggtcctcaaataaagacttcactccc
aacagagacaaaaaagctgattatgacaacagagagtattcaagttccaaacgtagagat
gaaaggaatgaattaacaagaagaaaagactctcctcctcggagtaaagactctgcatct
ggacaaaaaactaagccaagggaggagagagagttgcctaaaaaaggaacaggagattcc
aaaaaaagtaattctagtcccacgagagacaaaaaacctcatgatcataaagccacttat
gatactaaacgcttaagtgaagagacaaaatctgtagataaaaatccctgtaaagatcgt
gagaaacatatgttagaggcaaagaacaataaagagtcaagtggcaataaatcacttagt
atacttaacccacctgaggcacagattgagaaagagcaagttactgggcaaattgataag
aacaccatcaagcctaagccccagttaagtcactcctctcgactgtcctctgacttaact
agagaaactgatgaagctgcttttgaaccagactataatgaaagtgatagtgaaagcaat
gtgtctataaaagaggaagaaactgcaggaaaggtttctaaggaactgaaagataaagta
gtggagaaagcaaaggagagcctggacacggcagcagtcagccaggcaggcgtcaccagg
agccagagtcagagcagcccgagtgtcagtccaagcagaagtcacagcccttctggaagc
caaacccggagccacagcagcagtgccagctctgcagaaagtcaggacagcaagaagaag
aagaaaaagaaggaaaagaaaaagcacaagaaacataaaaagcataagaagcataagaag
catgcaggcactgaagcagaattggaaaaaagccaaaaacacaaacataagaaaaagaag
tcaaagaagagcaaagataaagaaaaggagaaggagaaggatgaccaaaaagtgaaatct
gtcactgtgtag
DBGET
integrated database retrieval system
