Bubalus bubalis (water buffalo): 102406511
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Entry
102406511 CDS
T05912
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03040
Spliceosome
bbub05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102406511 (HNRNPA1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102406511 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102406511 (HNRNPA1)
03041 Spliceosome [BR:
bbub03041
]
102406511 (HNRNPA1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102406511 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
102406511 (HNRNPA1)
Spliceosome [BR:
bbub03041
]
Common components
Common spliceosomal components
hnRNP proteins
102406511 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102406511
NCBI-ProteinID:
XP_006063771
LinkDB
All DBs
Position
4:94455829..94462268
Genome browser
AA seq
373 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGGFG
GGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGG
SSSSSSYGSGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatcagagtctcccaaagagcccgaacagctgcggaagctcttcatcggagga
ttgagctttgaaacaaccgatgagagtctgaggagccattttgagcaatggggaacgctc
acagactgtgtggtaatgagggatccaaacaccaagcgctccagaggcttcgggtttgtc
acatatgccacggtggaggaggtggatgcggccatgaatgcaaggccacacaaggtggac
ggaagagttgtggaaccaaagagggccgtctcaagagaagattctcaaagacctggtgcc
cacttaactgtgaaaaagatttttgttggtggcattaaagaagacactgaagaacatcac
ctgagagattattttgaacagtacgggaaaattgaagtaattgaaatcatgactgaccga
ggcagtggcaaaaagagaggctttgcttttgtaacctttgatgaccatgactccgtagac
aagattgtcattcagaaataccacactgtgaatggccacaactgtgaagtgagaaaagcc
ctgtctaagcaagagatggccagtgcttcatccagccagagaggtcgaagtggttctggg
aactttggtggcggtcgaggaggtggttttggtgggaatgacaactttggtcgtggagga
aacttcagtggtcgaggtggctttggtggcagccgtggtggtggcggatatggtggcagt
ggggatggatataatggatttggtaatgacggtggttatggaggaggcggccctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtggcagctatgacagctataacaacggtggaggcggaggcggctttggc
ggtggtagtggaagcaattttggaggtggcggaagctacaatgattttggcaattacaac
aatcaatcttcaaattttggacccatgaaaggaggaaactttggaggcagaagttctggc
ccctatggtggtggaggccaatactttgccaaaccacgaaaccaaggtggctatggtggt
tccagcagcagcagtagctatggcagtggcagaaggttttaa
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