Bubalus bubalis (water buffalo): 102406773
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Entry
102406773 CDS
T05912
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04340
Hedgehog signaling pathway
bbub05200
Pathways in cancer
bbub05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102406773 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102406773 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
102406773 (PTCH2)
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Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
102406773
NCBI-ProteinID:
XP_044801019
LinkDB
All DBs
Position
6:100835045..100853238
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AA seq
1219 aa
AA seq
DB search
MARPPPLGELPPGYTPPARPATPQILAGSLKAPLWLRAYFQGLLFSLGCGIQRHCGKVLF
LGLLAFGALALGLRVAIIETDLEQLWVEVGSRVSQELEYTKEKLGEEAAYTSQMLIQTPR
QEGENVLTPEALDLHLQAALTASKVQVSLYGKSWDLNKICYKSGVPLIENGMIERMIEKL
FPCVILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDK
AQVGQAYVGRPCLHPDDLHCPPSAPNHHSKQAPNVAQELSGGCHGFSHKFMHWQEELLLG
GMARDPQGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEEQAGTVLQAWQRRFV
QLAQEALPENASQQIHAFSSTTLDDILHAFSEVSAARVAGGYLLMLAYACVTMLRWDCAQ
SQGAVGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALGIGVDDIFLLAHAFTE
APPGTPLQERTGECLRRTGTGVTLTSVNNMVAFFMAALVPIPALRAFSLQAAIVVGCNFA
AVMLVFPAVLSLDLQRRHCRRLDVLCCFSSPCSARVIQILPQELGNGTVPVGVAHLTATV
QAFAHCEASSQHVVTILPPQAHLVPPPSDPLGSELFSPGGSTRDLLGQEEGTGQKAACKS
LPCARWNLAHFARSQFAPLLLQSPTKLSHLSPQAVVLALFGALLGLSLYGATLVQDGLAL
TDVVPRGTKEHAFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPP
ATQAPRTWLHYYRSWLQGIQAAFDQDWASGRITRHSYRNGSEDGALAYKLLVQTGDAQEP
LDFSQLTTKKLVDKEGLIPPELFYMGLTVWVSSDPLGLAASQANFYPPPPEWLHDKYDTT
GENLRIPAAQPLEFAQFPFLLRGLQKTADFVEAIEGARAACAEAGQAGVHAYPSGSPFLF
WEQYLSLRRCFLLAVCILLLCTFLVCALLLLNPWTAALIVLVLAMMTVELFGIMGFLGIK
LSAIPVVILVASIGIGVEFTVHVALGFLTAQGSRNLRAARALERTFAPVTDGAISTLLGL
LMLAGSNFDFIVRYFFVVLTILTLLGLLHGLVLLPVLLSILGPPPEPLRSLLGHLLPHQL
PMAPATSGLGDCVQPRGERAAKAWRSHSGHMKSLGSSGALLKTGRTPGEPCCCCHLIPSP
DGAIGDLPEIHTKPPLSRP
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccgccacctctcggggagctgcccccgggctacacacccccagctcgacct
gcaacaccccagatcctagctgggagcctgaaggctccgctctggctccgtgcttacttc
cagggcctgctcttctctttgggctgcgggatccagagacactgtggcaaagtgctcttc
ctgggactgttggcctttggggccctagcactgggtctccgcgtggccatcattgagaca
gacctagaacagctctgggtggaagtgggcagccgggtgagccaggaactggaatacacc
aaggagaagctgggggaggaggctgcgtatacctcccagatgttgatacagaccccgcgc
caggagggggagaacgtcctcacgcccgaggcacttgacctccacctccaggcagccctc
accgccagtaaagtgcaagtatccctctatggaaagtcctgggatctgaacaaaatctgc
tacaagtcaggagttcccctaattgaaaatggaatgattgagcggatgattgagaagctg
tttccctgcgtgatcctcacccccctcgactgcttctgggagggagccaaactccaaggg
ggctctgcctacttgccgggccgcccagacatccagtggaccaacctggacccagagcag
ctgcttgaggagctgggcccctttgcctcccttgagggcttccgggagctgctagacaag
gcacaggtgggccaggcctacgtgggtcggccctgtctgcaccctgacgacctccactgc
ccacctagtgcccctaaccatcacagcaagcaggctcccaacgtggctcaggagttgagt
gggggctgccatggcttctcccacaagtttatgcactggcaggaggagctgctgctggga
ggcatggccagagacccccaaggacagctgctgagggcagaggccctgcagagcaccttc
ctgctaatgagcccccgccagctctacgagcacttccgaggtgactaccagacgcatgac
atcggctggagcgaggagcaggccggcacggtccttcaggcctggcagcgacgctttgtg
cagctggcccaggaggccctgcccgagaacgcatcccagcagattcacgccttctcctct
accaccctggatgacatcctgcacgccttctctgaagtcagcgctgctcgcgtggcgggg
ggctacctgctcatgctagcctatgcctgtgtgacgatgctgcggtgggactgtgctcag
tcccagggtgcagtgggcctcgctggtgtgctgctggtggccctggcagtggcctcgggc
ctggggctctgtgccctgttgggcatcgccttcaacgctgccactacccaggtgctgcct
ttcttggcactgggcatcggcgtggacgacatattcctgctggcacacgccttcacagag
gctccacctggcacccctctccaggagcgcacgggggagtgtctgcggcgcacaggcacc
ggtgtcacactcacatccgtcaacaatatggtcgccttcttcatggccgccctagtcccc
atccctgcacttcgggccttctccttgcaggcagccatagtggtgggctgcaactttgca
gccgtgatgcttgtcttcccagcggtcctcagcctggacctgcagcggcgccactgccgg
cgcctggatgtgctctgctgcttctctagcccctgctctgctcgggtgattcagattctg
ccccaggagctggggaacgggacggtaccagtgggcgttgcccacctgactgccacggtt
caagcctttgcccactgtgaagccagcagccaacatgtggtcaccatcttgcctccccaa
gctcacctggtgccgccaccttctgaccctttgggctctgagctcttcagcccaggaggg
tccacacgggaccttctagggcaggaggaggggacagggcagaaggcagcctgcaagtcc
ctgccctgtgcccgctggaatcttgcccatttcgcccgctctcagtttgcacccttgttg
ctccagtcccccaccaagcttagtcacctttccccacaggctgtagtactggcacttttt
ggggctctcctgggcctgagcctctatggagcgaccttggtgcaggacggtctggccctg
actgatgtggtgccgcgtggcaccaaggagcatgccttcctgagcgcccagctcaggtac
ttctctctgtacgaggtggctctggtgacacagggtggctttgactacgcccactcccaa
cgcgccctctttgatctgcaccagcgcttcagttccctcaaggccgtgctgcccccaccg
gccacccaggcaccccgcacctggctgcactactaccgcagctggctacagggaatccag
gctgcgtttgaccaggactgggcttctgggcgcatcacccgccactcataccgcaatggc
tctgaggatggggccctggcatacaagctgcttgtccagaccggggatgcccaggagcct
ctagatttcagccagctgaccaccaagaagctggtggacaaggaagggctgatcccaccc
gagctcttctacatggggctgaccgtgtgggtgagcagtgaccccctgggtctggcagcc
tcacaggccaacttctatcccccacctcctgagtggctgcatgacaagtacgataccacg
ggggagaatcttcgcatcccggcggcccagcccttggagtttgcccagttccccttcctc
ctgcgcggcctccagaagactgcagacttcgtggaggccatcgagggggcccgggcagcg
tgtgccgaggccggccaggccggggtgcatgcctaccccagcggctcccccttcctcttc
tgggagcagtacctgagcctgcggcgctgcttcctgctggcggtctgcatcctgctgctg
tgtactttcctcgtctgtgccctgctgctgctcaacccctggacggctgcgctcatagta
ctggtcctggcgatgatgactgtggagctctttggcatcatgggtttcctgggcatcaag
ctgagtgccatcccggtggtgattcttgtggcctccataggcatcggtgtcgagttcacc
gtccacgtggctctgggcttcctgaccgctcagggtagccggaacctgcgggctgcccgg
gccctggagcgcacatttgccccagtgaccgatggggccatctccacgttgctaggtctg
ctcatgcttgctggctccaactttgacttcatcgtaaggtacttctttgtggtgctgaca
atacttacactcctgggcctcctccacgggctcgtgctgctgccggtactgctgtccatc
ctgggccccccaccagagcctctgaggagcctacttggtcacctgctgccacaccagctg
ccaatggccccagcaacctcgggtctaggggactgtgtccagccacggggtgaaagagca
gccaaagcatggagatcccattcaggccacatgaagtcattgggaagcagtggggcattg
ctgaagacagggcggactcctggggagccctgctgctgctgccacctcattccctcccca
gatggggccatcggagacctccctgaaatccacacaaagccgccactgtctaggccgtga
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