Bubalus bubalis (water buffalo): 102406962
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Entry
102406962 CDS
T05912
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102406962 (APEX2)
Enzymes [BR:
bbub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
102406962 (APEX2)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
102406962 (APEX2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
102406962
NCBI-ProteinID:
XP_006048257
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Position
X:complement(50362684..50370341)
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AA seq
514 aa
AA seq
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MLRLVSWNINGIRSPLQGVRYEEPSSCSAMAMGRILDKLDADIVCLQETKVTRDVLTEPL
AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDDFT
QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQI
RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNMECFEEDPGRKWMDGLLSNLGCESGSHV
GPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPEVM
GSDHCPVGAVLSVSSVPAKQCPPLCTCFLPEFAGTQLKILRFLVHFKQDPVFKQSALQPS
NQTQVHMRQNKARVRSTRSRPSKTGSSRGQKNLMSYFQPSSSGPQTSNLDLPSLGTLITP
KTSEEDVMANVVEGQAKASEAKDEKEIRTSFWKSLLGGPSPMPLCGGHREPCVMRTVKKP
GPNLGRHFYMCARPQGPPTDPSSRCNFFLWSRPS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcttggtgagctggaacatcaatgggatccggagccccttgcaaggggtgaga
tacgaggagcccagcagctgcagcgccatggccatggggcgcattttggacaagctggat
gcagacatcgtctgtcttcaggagaccaaagtaaccagggatgtgctgacagagcccctg
gctatcattgagggctacaactcctatttcagcttcagccgtaaccgcagtggctattct
ggtgtagccactttctgtaaggacagtgctacccccgtggctgctgaagaaggcctgagt
ggcctgctttccactcagaatggggatgtgggttgctatggaaacatggatgacttcacc
caagaggaacttcgagctctggatagtgagggccgggccctcctcacacaacacaaaatc
tgcacatgggaagggaaggagaagaccttgaccctaatcaacgtgtactgcccccatgcg
gaccctgggaagcctgagcgactcacctttaagatgcgcttctatcgcttgctgcagatc
cgagcagaagctctcctggcagctggcagccatgttatcattctgggtgatctgaataca
gcccaccgccccattgatcactgggatgcagtcaacatggaatgctttgaagaggaccca
gggcgcaagtggatggatggtttgctcagtaacctggggtgcgagagtggctcccacgtg
ggacccttcatcgatagctaccgctgcttccagccaaagcagaagggggccttcacctgt
tggtcaacagtcagtggtgcccgccatttgaactatggctcccggcttgactacgtgttg
ggggataggaccctggtcatagacacctttcaggcctccttcttgctgcctgaggtgatg
ggctctgatcactgccctgtgggtgcagtcttaagcgtgtcctctgtgccagcaaaacag
tgcccacctctgtgcacctgcttcctccccgagtttgcaggtacccaactcaagatccta
cgattcctggttcacttcaaacaagatcctgtgttcaagcagtcagcactacagcccagc
aatcaaacacaggtacacatgcgccaaaacaaagcccgtgtgcgctcaactaggtcccgg
ccaagtaaaactggctccagtagaggccaaaaaaacctgatgagctacttccagccatcc
tccagtggcccccaaacttctaacttggatcttcctagcctgggcacccttataacccca
aagacctcagaagaggacgtgatggccaatgtggtggaggggcaggccaaggcttcagag
gccaaggatgaaaaggagatacggacctcattctggaagtctctgctggggggaccctcg
cccatgcccctctgtgggggacacagggagccatgtgtaatgcgaactgtaaagaagcca
ggacccaacctgggccgccacttctacatgtgtgccaggccccagggtcctcccactgac
ccctcttcccgctgcaatttcttcctctggagcaggcccagctga
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