Bubalus bubalis (water buffalo): 102407029
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Entry
102407029 CDS
T05912
Symbol
ARNT
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X2
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04066
HIF-1 signaling pathway
bbub04148
Efferocytosis
bbub04934
Cushing syndrome
bbub05200
Pathways in cancer
bbub05207
Chemical carcinogenesis - receptor activation
bbub05208
Chemical carcinogenesis - reactive oxygen species
bbub05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
102407029 (ARNT)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102407029 (ARNT)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102407029 (ARNT)
05207 Chemical carcinogenesis - receptor activation
102407029 (ARNT)
05208 Chemical carcinogenesis - reactive oxygen species
102407029 (ARNT)
09162 Cancer: specific types
05211 Renal cell carcinoma
102407029 (ARNT)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
102407029 (ARNT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102407029 (ARNT)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102407029 (ARNT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
102407029
NCBI-ProteinID:
XP_006058186
EnsemblRapid:
ENSBBUG00015002630
LinkDB
All DBs
Position
6:19982604..20049912
Genome browser
AA seq
790 aa
AA seq
DB search
MAATTANPEMTSDVPPLGPAIASGNPGPGIQGGGAIVQRAIKRRPGLDFDDDGEGNSKFL
RCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCS
ALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVS
CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLK
TGTVKKEGQQSSMRMCMGSRRSFICRMRCGNSSVDSVSMNRLSFVRNRCRNGLGSAKDGE
PHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFCLVAIGRLQVTSSPNCTDMSNVCQP
TEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKG
QVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQEPRPSLSNTIQ
RPQLGPTANLSLEMGSGQLAPRQQQQQTELDVVPGRDGLTSYNHSQVSVQPVTTTGPEHS
KPLEKSESLFAQDRDPRFSEIYSNISTDQSKGISSSTVPATQQLFSQGNTFPPTPRPAEN
FRNSGLAPPVTIVQPSTSAGQMLAQISRHSNPTQGAAPAWTPSTRPGFSAQQVVTQATAK
TRSSQFGVGSFQTPSSFSPMSLPGASTASPGAAAYPSLTNRGSNFAPETGQTAGQFQTRT
AEGVGVWPQWQGQQSHHRSSSNEQHVQQPSAQQPGQPEVFQEMLSMLGDQSNSYNNEEFP
DLTMFPSFSE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactactgctaaccccgaaatgacatcagatgtaccacctctgggtccagcc
attgcctctggaaaccctgggcctgggattcaaggtggaggagccatcgtccagagggct
attaagcggcgaccaggattggattttgatgatgatggagaagggaacagtaaatttttg
aggtgtgatgatgatcagatgtctaatgataaggagcggtttgccaggtcggatgatgag
cagagctctgcggataaggagagactcgccagggaaaaccacagtgagattgaacggcga
cgacggaacaagatgacagcctacataacagaactgtcagacatggtacccacctgtagc
gccctggctcggaaaccagacaagctaaccatcttacgcatggcagtttctcacatgaag
tccttgagaggaactggcaacacatccaccgacggcacctacaagccgtctttcctcact
gatcaggaactgaaacatttgatcctggaggcagcagatggctttctgtttattgtctca
tgtgagacaggccgggtggtatacgtctctgactcagtgaccccagttttgaaccaacca
cagtctgagtggtttggtagcacgctgtatgatcaggtgcacccagatgatgtggacaaa
cttcgtgagcagctttccacttcagaaaatgcgctgacagggcgtatcctggatctgaag
actggaacagtgaaaaaggaaggtcagcagtcttccatgaggatgtgtatgggctcaagg
agatcatttatttgccgtatgaggtgtggcaatagctctgtggattcagtctccatgaat
aggctgagctttgtgagaaacagatgcaggaatggacttggctctgcgaaggatggggaa
cctcatttcgtggtggtccactgcacaggctatatcaaggcctggcccccagcaggtgtc
tcacttccagatgatgacccagaagctggccaggggagcaagttttgcctagtggccatt
ggcagactgcaggtaactagttctcccaattgtacagacatgagtaatgtttgtcaacca
acagagttcatctctcgacacaatattgagggaatcttcacttttgtggatcatcgctgt
gtggctactgttggctaccagccacaggaactcttaggaaagaatattgtagaattctgt
catcctgaagaccagcagcttctaagagacagcttccaacaggtcgtgaagttaaaaggc
caggtgctgtctgtcatgttccggtttcggtctaagaaccgagaatggctctggatgaga
accagctcttttactttccagaacccttactcagatgaaattgagtacatcatctgtacc
aacaccaatgtgaagaactctagccaggaaccacggccttcactgtcaaacacaatccag
aggccacagctaggtcccacagctaatttatccctggagatgggctcagggcagctggca
cccaggcagcagcagcagcaaacagaattggatgtggtaccaggaagagatggactaacc
agctacaatcattcccaggtttctgttcagcctgtgacaaccacagggccagaacacagc
aagccccttgagaagtcagagagtctgtttgcccaagatagagatccaagattttcagaa
atctactccaacatcagtacggatcagagtaaaggcatctcctccagcactgtccctgcc
acccaacagctattctcccagggcaacacattccctcctaccccccggccggcagagaat
ttcagaaatagtggtctggcccctcctgtaaccattgtccagccatcaacttccgcaggg
cagatgttggcccagatttcccgccactccaatcctacccagggagcagccccagcttgg
acccctagcacccgcccaggcttctctgcccagcaagtggttacccaggctacagctaag
actcgttcttcccaatttggtgtaggcagctttcagactccatcttctttcagccccatg
tcccttcctggtgcttccactgcatcacctggtgcagctgcctatcctagtctcaccaat
cgtggatccaactttgctcctgagactggacaaactgcaggacaattccagacacggaca
gcagagggtgtgggtgtctggccacagtggcagggccagcagtcgcatcatcgttcaagt
tctaatgagcaacatgttcaacagccatcagcacagcaacctggccagcctgaggtcttc
caggagatgctgtccatgctgggagaccagagcaacagttacaacaatgaagaatttcct
gacttaactatgtttccctccttttcagaatag
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