Bubalus bubalis (water buffalo): 102407091
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Entry
102407091 CDS
T05912
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102407091 (SMC6)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
102407091 (SMC6)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
TPR_MLP1_2
AAA_23
AAA_29
HJURP_C
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
102407091
NCBI-ProteinID:
XP_006051941
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All DBs
Position
12:80439790..80515461
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AA seq
1098 aa
AA seq
DB search
MAKRKEENFFSPGNAKRPRQEELDDFDKDECDEDECAVSFTNGTSTLTAAEVGIIESIQL
KNFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAITTNRGSSLKGFVKDG
QNSADISITIRNRGDDAYRGNVYGDTIIVQQHISMDGSRSYKLKSATGAVVSTKKEELIG
ILDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERT
KEQINQGEERLSELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAI
RDNIKIGEDRAARLERKTEEQQVRLNEAEKKYKDIQDKLEKISQETNARAPECMALKADL
TSKKRAYNEAEVLYNRSLNEYKALKKDDEQLCRRIEELRKSADQSLEPERLERQKKISWL
KERVKALQDQESSVNQEMEQFQQAIEKDKEEHTRIKREELDVKTTLNFNQRQLKELKDSK
TDRLKRFGPHVPALLEAIDDAYRRGHFTYKPVGPLGACIHLRDPELALAIESCLKGLLQA
YCCHNHADERVLQALMKKFYSPGTSRPQIIVSEFRNEMYDVRHRAAYHPEYPTVLTALEI
DNAVVANSLIDMRSIETVLLIKNNSVARAVMQSQRPPKNCREAFTADGDQVFAGRYYSSE
YTRPKFLSRDVDSEISDLEDEVENKKAQILNLQQHLSTLQKDIKCNEELLRRCQLHYKEL
KMKIRKSISEIRELENIEEHQSVDIATLEDEAQENKIKMKMVEKNMEQQKENMEHLKSLK
VEAENKYDEIKQKINQLSELADPLKDELNLADSEVDNQKRGKRHYEDKQKEHLDTLNKKK
RELDMKEKELEEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASYGDREEIMK
QYQEARESYLDLDSKVKTLKRFIKLLEEIMIHRYKTYQQFRRCLTLRCKLYFDNLLSQRA
YCGKMNFDHKNETLTISVQPGEGNKAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRC
LDEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERG
QTTLPFRPVSQEDDDDRS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaaggaagaaaattttttctctcctggaaatgccaaaagaccaagacaa
gaagaattggacgattttgataaagatgaatgtgacgaagatgaatgtgcagtttctttc
actaatggtacctctactttgacagcagcagaagttggaataattgagagtattcagctc
aaaaacttcatgtgtcattcgatgcttggaccctttaagtttggttctaatgtcaacttt
gttgttggcaataatggaagtggcaagagtgcggtgctcacagctctcatagttggtctt
ggtggaaaagctatcactactaatcgaggatcttctttaaaaggttttgtgaaggatgga
cagaactcagcagatatctcaataacaataaggaacagaggggatgatgcctacagagga
aatgtgtatggcgacactattattgtgcaacaacacatcagcatggatggaagtcgatct
tacaaactgaagagtgcaacaggtgctgtggtttctactaagaaagaagaactgattgga
attcttgatcattttaacattcaggtagataatccggtttctgttttaacacaagagatg
agcaagcagttcttgcagtctaaaaatgagggagacaagtacaaattctttatgaaagca
acccaacttgaacaaatgaaggaagactattcatacattatggaaacaaaagaaagaaca
aaagagcagataaatcaaggagaagagcgacttagtgaactaaagcgccagtgtttggag
aaagaagaacgttttcaaaatatcgctggcttaagtacaatgaagaccaacctggaatac
ctgaaacatgaaatggcttgggcagtggtcaatgaaattgaaaagcaattgaatgctatc
agagataacatcaaaattggagaagatcgtgctgctagacttgagaggaaaacggaggag
cagcaggtcagacttaatgaagcagaaaaaaaatacaaagacattcaagataaactagaa
aagattagtcaagagacaaatgcacgagcgccagaatgtatggcactgaaagcagatctt
acttctaagaaaagggcctataatgaagctgaggttttatataatcgttccctaaatgag
tataaagcattgaagaaagatgatgagcagctctgcagaagaattgaagaactgagaaaa
agtgccgatcagtctttggaacctgaacggttggaaaggcaaaaaaaaatatcttggtta
aaagagagagtaaaggccttacaagatcaagaaagttcagtcaatcaagagatggaacaa
tttcagcaagccatagaaaaagacaaagaagaacataccaggattaagagagaagagtta
gatgtgaagactacactgaactttaaccagaggcaactgaaagaattgaaagatagtaaa
actgatcgactcaaaagatttggccctcacgttccagctcttcttgaagccatagatgat
gcctacagacggggacactttacctataaacctgtaggcccattaggagcttgcattcat
cttcgggaccctgagcttgctttggctattgaatcttgcttaaaaggacttcttcaagcc
tattgttgccataaccatgctgatgaaagagtgcttcaggcattgatgaaaaagttttat
tcaccagggacctcacggccacagataatagtttctgagtttcggaatgagatgtatgat
gtaagacacagagctgcatatcatccagagtacccaacggttctgacagcgttagaaata
gataatgcagttgttgcaaatagcctgattgacatgcgaagcatagagacagtgctgcta
atcaaaaataattctgtagctcgtgcagtgatgcaatcccaaaggccacccaagaattgt
agagaagcttttactgctgatggtgatcaggtttttgcagggcgttattattcatctgaa
tatacaagacctaagtttctaagcagagatgtggattctgaaataagtgacttggaggat
gaagttgaaaataagaaagcccagatattaaatcttcagcaacatctgtctacccttcaa
aaggatattaaatgcaatgaagaacttctcagaaggtgccaactgcattacaaagagtta
aagatgaaaataaggaaaagtatttctgaaattcgggaacttgagaatatagaagaacac
cagtctgtagatattgcaaccttggaagatgaagctcaagaaaataaaatcaagatgaaa
atggttgagaaaaatatggaacaacaaaaagaaaatatggaacatcttaaaagcctgaaa
gtagaagcagaaaacaagtatgatgaaattaaacagaaaattaatcagctctcagagcta
gcagatccacttaaggatgaattaaaccttgctgattctgaagtggataaccaaaagcga
gggaaacggcattatgaagacaagcagaaagaacacttggatactttaaataaaaagaaa
cgagaactagatatgaaagaaaaagagctagaggagaaaatgtcacaagcaagacaaatc
tgtccagagcggatagaagtgaaaaaatctgcctcaattctagacaaagaaattaataga
ttaagacagaagatacaggcagaacatgctagttatggagatcgagaggaaataatgaag
caatatcaagaggcaagagaaagctatcttgatttggatagcaaagtaaagactttaaaa
aggtttattaaattactggaagaaataatgatccatagatataaaacatatcaacaattt
agaaggtgtttgactttacgatgtaaattgtactttgacaacttattatctcagcgggcg
tattgtggaaaaatgaattttgaccacaagaatgaaactcttactatatcagttcagcct
ggagaaggaaacaaagccgctttcaatgacatgcgggccttatctggcggtgaacgttca
ttttccacggtttgcttcattctttctctgtggtccatcgctgaatctcctttcagatgc
ctggatgagtttgatgtctacatggatatggttaaccggaggattgcgatggacatgata
ctcaagatggcagattcccagcgcttcagacagtttatcctgcttacccctcaaagcatg
agttcacttccatcaagtaaactgattagaattcttcgaatgtctgatcctgaaagagga
caaactacattgcctttccgacctgtatctcaagaagacgatgatgaccggagttga
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