KEGG   Bubalus bubalis (water buffalo): 102407159
Entry
102407159         CDS       T05912                                 
Symbol
GLE1
Name
(RefSeq) nucleoporin GLE1
  KO
K18723  nucleoporin GLE1
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03013  Nucleocytoplasmic transport
bbub03015  mRNA surveillance pathway
bbub05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102407159 (GLE1)
   03015 mRNA surveillance pathway
    102407159 (GLE1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102407159 (GLE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bbub03019]
    102407159 (GLE1)
Messenger RNA biogenesis [BR:bbub03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102407159 (GLE1)
SSDB
Motif
Pfam: GLE1 TERF2_RBM
Other DBs
NCBI-GeneID: 102407159
NCBI-ProteinID: XP_006065415
LinkDB
Position
12:98518028..98543694
AA seq 698 aa
MPSEGRCWETLQALRSSDKGRLCYDRDWLLRGEDVLQECMSLPKLSSYSGWVVDHVLPHI
QKNAPPSETSASSVSTSALDQPSSVPRSPLRNPAYSPVSSATSDGTRDKRESPHTEPMVL
QSPRGMKVEGCIRMYELVHRMKGAEGLRQWQEEQEKKVRALSEMASEQLKRFDERKELKH
HKEFQDLREVMEKSSREALGQQEKLKAEHRHRAKILNLKLREAEQQRLKQEEQERLRKEE
GQARLRGLYALQEEVLHLSQQLDASDQHRDLLQVDLSAFRTRGNQLCSLVSGIIRATSEN
GFPTVEDQAAAEGALQEMRDLLSNLHQEIRRACEEKRRRDEEEARIKQQESQMQQRPEAH
KELPVPNQGPGAKLNEDLQVKVQDSTMQWYQQLQEASSQCVLAFEGLSNSKDSQAKKIKM
DLQKAATIPVSQISTIAGSKLKEIFDKIHSLLSGKPVQSGGRSVSVTLNPQGLDFVQYKL
AEKFVKQGEEEVASHHEAAFPIAVVASGIWELHPRVGALILAHLHKKCPYSVPFYPAFKE
GMALEDYQRMLGYQVKDSKVEQQDNFLKRMSGMIRLYAAIIQLRWPYGNRQETHPHGLNH
GWRWLAQILNMEPLSDVTATLLFDFLEVCGNALMKQYQVQFWKMILLIKEDYFPRIEAIT
SSGQMGSFIRLKQFLEKCLQHREIPVPKGFLTASFWRS
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgccttctgagggtcgctgctgggaaactctgcaggctctgcgcagttccgacaaaggt
cgcctctgctacgaccgcgactggctgctgcggggtgaggatgttttacaagaatgtatg
tctcttcctaagctgtcttcgtactctggatgggtagtagatcatgtcctgccccacata
caaaagaacgcacctccctctgagacgtcagcatcctctgtgtctacttcagccctcgac
caaccttcatctgttcccagatctcctctcagaaaccctgcctactcaccggtctcctca
gcaacatcagatggaaccagggataaacgtgagtctccacatacagagcctatggtactt
cagtccccccgggggatgaaagtggaaggctgcatccgaatgtatgagctggtgcacaga
atgaaaggagcagagggcttgaggcagtggcaggaggagcaggagaagaaggtgcgggcc
ctttctgagatggcatctgaacagctgaagcggtttgatgaacgaaaggaactgaagcat
cataaagaattccaggacttacgggaagtaatggagaagagctccagagaagccctgggg
cagcaagagaagctgaaagccgagcatcgtcacagagcgaagattctcaacctgaagctg
cgggaagcggagcagcagcgcctgaagcaagaggagcaggagcggctccggaaggaagaa
ggccaggcccgcctgcgcggcctctatgccctgcaggaggaggtgctgcacctcagccag
cagctggacgcctcggaccagcacagggacctgcttcaggtcgacctgtctgccttccgg
acccgaggcaaccagctgtgcagtcttgtctcagggatcatccgggccacttctgagaac
ggctttcccacagtagaggaccaagctgcggctgagggagcgctacaggaaatgcgcgac
ctcctctcgaacttgcatcaggagatccgtagggcctgtgaggagaagaggaggcgggat
gaagaggaggcccggataaagcagcaagagtcacagatgcagcagaggccggaggcccac
aaagagttgcccgttcccaaccagggcccaggggcgaagctgaacgaagatctccaggtg
aaggtgcaagacagtacaatgcagtggtaccagcagctgcaggaggcctccagtcagtgt
gtgctggccttcgagggcctgagcaacagcaaagacagtcaggccaaaaagatcaagatg
gacctccagaaggctgccaccattccagtgagccagatctctaccattgcaggctcgaag
ctgaaggagatctttgacaagatccacagcttactttctggaaaacctgttcagtctggc
gggcgctccgtgtctgtcacacttaatccacagggcctggactttgtccagtacaaactg
gcagagaaatttgtgaaacaaggggaggaggaagtggcctcccatcacgaagcagcattc
cccatcgcggtcgtggcgtccgggatctgggagctccaccccagagtaggggccctcatc
ctggctcacctgcacaagaagtgtccttactctgttcctttctatccagcattcaaagag
ggaatggctttggaagactatcagaggatgcttggctaccaagtgaaggattccaaagta
gagcagcaggacaactttctcaagcgcatgtctgggatgatccgcctctatgccgccatc
atccagctccggtggccatatggaaaccgacaagagactcaccctcatggcttaaatcat
ggttggcgctggttggcacagatcttaaacatggagcccctgtcagatgtgacggccacc
ctcctctttgacttcttagaggtgtgtgggaatgccctcatgaagcagtaccaggtccag
ttctggaagatgatacttctcatcaaagaggactacttccccaggattgaagccatcaca
agctcagggcagatgggttccttcatacgcctcaagcagttcttggagaaatgtctgcag
cacagggagattcctgtccccaagggcttcctgactgcctccttctggcgttcctga

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