Bubalus bubalis (water buffalo): 102407193
Help
Entry
102407193 CDS
T05912
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102407193 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102407193 (CSTF2T)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102407193 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
102407193 (CSTF2T)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102407193
NCBI-ProteinID:
XP_006072411
LinkDB
All DBs
Position
23:7848464..7850872
Genome browser
AA seq
632 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQSVSGPGPGLCPGPNVLLNQQNPPAPQPQHLARRP
VKDIPPLMQTPIQGGIPPQGPMPAAVPGPGSLTPGGTMQPQVGMPGVGPVPLERGQVQIS
DPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHAA
GHDSRGPSSHEMRGGPLADPRMLMSEPRGPMIDQRGLPMDGRGSRDSRGMETRAMETEVL
ETRVMERRGMETCAMETRGMEARGMDARGMEMRGPGPSSRGPMTGGIQGPGPINMGAGGP
QGPRQVPSISGVGNPGPGMQGAGMQGGGMQGAGMQGGGMQGAGMQGGGMQGAGMQGGGMQ
GAGMQGGGMQGAGMQGAGMQGAGMQGAGKQGGGQPSSFSPGQSQVTPQDQEKAALIMQVL
QLTADQIAMLPPEQRQSILILKEQIQKSTGTS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcaatggatcggtcactgcgttccgtgttcgtg
gggaacattccgtatgaggcgactgaggagcagttaaaggacattttctcggaggttggt
tctgttgtgagtttccggctggtatacgatagagagacgggcaaacctaagggttatggc
ttctgcgagtaccaagaccaggagaccgcacttagtgccatgcggaaccttaatgggcgg
gagttcagcgggagagcgcttcgggtggacaatgcagccagtgaaaagaacaaggaggag
ctaaagagcctagggcctgcagcgcctatcattgactcaccctacggggaccctatcgat
ccagaagatgctcctgagtcgattaccagagcagtcgctagtcttcccccggagcaaatg
tttgagctgatgaagcagatgaaactctgtgtccaaaacagccaccaggaagctcgaaat
atgttacttcaaaacccacagctggcttacgcgctgttgcaggcacaagtagtgatgaga
atcatggatccagagattgctctgaaaattttgcatcgcaaaattcatgtcacaccactc
atcccagggaaatctcaatccgtttctggccctggccctgggctctgtcctggacctaac
gttctgctgaaccagcagaaccccccggcccctcagcctcaacatttggccagaagacct
gtgaaagacatccctcctctgatgcagacccctatccaaggtggaattccaccccaaggc
ccaatgccagccgcagttcctggccctggctccttaactcctggcggaacaatgcagccc
caagttggaatgccaggggttggtcccgtgcccttagagcgggggcaggtgcagatatct
gatcccagagctcctatgcctcgtgggcctatgactgctggtggcctgcctcctcgagga
ctgttaggggatgctccaaatgacccacgtggagggactttgctttcagtcaccggagaa
gtggagcccagaggctatcttggcccaccacatcagggtcctccaatgcaccatgccgct
gggcatgacagccggggcccttcctcacatgagatgaggggagggcccttagcagatcct
agaatgctcatgagtgagcccagaggacctatgatagaccaaagggggctacctatggat
ggcagaggcagcagagactctcgagggatggagactcgagccatggaaacagaggtcttg
gagacacgagtgatggagagaagaggaatggagacctgtgcaatggaaaccagaggaatg
gaagcgagaggcatggatgcaagaggaatggagatgaggggccctggccccagttcgaga
ggccctatgactgggggaattcagggtcctggtcctattaatatgggggcaggtggtcct
cagggacccagacaggttcccagcatttcaggggtgggaaaccctggacctggcatgcag
ggggcaggtatgcaaggaggtggcatgcagggggcgggcatgcaaggaggtggcatgcag
ggggcgggcatgcaaggaggtggcatgcagggggcgggcatgcaaggaggtggcatgcag
ggggcgggcatgcaaggaggtggcatgcagggggcgggcatgcaaggagctggcatgcag
ggggcgggcatgcaaggagctggcaagcaaggtggaggccagcctagcagttttagtcct
gggcagagccaagtaaccccccaggatcaagaaaaggcagctttgatcatgcaggttctt
cagctgactgcagatcagattgccatgctgcctcctgagcaaaggcagagtatcttgatt
ttaaaggaacaaatccagaaatctactggaacttcttga
DBGET
integrated database retrieval system
