Bubalus bubalis (water buffalo): 102407226
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Entry
102407226 CDS
T05912
Symbol
ELP1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbub03016
]
102407226 (ELP1)
Transfer RNA biogenesis [BR:
bbub03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
102407226 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
CHASE4
MMU163
Herpes_UL37_2
Motif
Other DBs
NCBI-GeneID:
102407226
NCBI-ProteinID:
XP_044796334
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All DBs
Position
3:complement(160281158..160344939)
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AA seq
1332 aa
AA seq
DB search
MRNLKLLRSLEFRDIQAQGKPQCLCLRAEQATVVIGSEHGLVEVDPVTREVKNEIPLVAE
GFLPEDGSGCIIGIQDLLDQESVCVATASGDVLLCNLNTHQLECVGSVASGISVMSWSPD
QELVLLATGQETLIMMTKDFEPIMEQQIHQDDFGESKFITVGWGRKETQFHGSEGRQAAF
QMQMHESALPWDDHRPQITWRGDGQFFAVSVVCPETGARKVRVWNREFALQSTSEPVAGL
GPALAWKPSGSLIASTQDKPNQQDVVFFEKNGLLHGQFTLPFFRDEVKVNGLFWNADSTV
LAVWLEELQREENSSLKTYVQLWTVGNYHWYLKQSLPFDTCGKSKIVSLLWDPVSPYRLH
VLCQGWHYLCYDWHWTTDRSSGDNLSDMANVAVIDGNRVLVTVFRQSVVPPPMCTYRLQL
PHSVNQVMFSARPEKSNDLAVLDASNQISVYKCGDSPSIDSTVKLGAVGGNGFKISLRMP
HLDKRYKIPIEDSEAEEVNPLKLSLLAWAQEDTFLAVSHSQSGPRSAVHHLTVAPSETDD
EQGQLNISSSVTVDGVIISLCCNPKTKSVALQVAGGQIFKYLWESPSLAVEPWKNPGGFP
VRFPYPCTQTELAMIGGEECILGLTDRCRFFINDTEVASNITSFAVYDEFLLVTTHSHTC
QCFCLRDASLKTLQAGLSSSHVPNGESLRKVERGSRIVTVVPQDTKLILQMPRGNLEVVH
HRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDHNPKVFLENVETFIRQIDSVNHI
NLFFTELKEEDVTKTMYPPPVPSTVPLSSDPDEKKVDLICDAMRAAMENINPHKYCLSIL
TSHVKKTTPELEIALQKVHELQGNAPPVPDAVSAEEALKYLLLLVDVNELYDHSLGTYDF
DLVLMVAEKSQKDPKEYLPFLNTLKKMEMNYQRFTIDKHLKRYEKAIGHLSKCGPEYFPE
CLNLIKDKNLYNEALKLYPPNSQQYKDISIAYGEHLLQEHLHEPAGLMFARCGAHEKALS
AFLACGSWQQALCAAAQLHLTAEQLAGLGRTLAGKLVEQRKHSDAATVLEQYAQDHEEAV
LVLLEGAAWEEALRLVHKYNRPDIIETNIKPSILEAQKNYMVFLDSQTATFSRHKKRLLV
VRELKEQAQPVSLDDEAPHGPESDLFSETSSTMSGSNLSGGYSHSNSRISARSSKNRRKA
ERKKHSLKEGSPLEDVALLEALSEVVQGTEKLKDEICHILKMLFLFEFDEQGRELQKAFE
DTLQLMERSLPEIWTLTPQQSSATSVLGPNSTANSIMASYQQQKTSVPVLDAELFMPPKI
NRRTQWKLSLLD
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatctaaagttacttcggagcctggagttcagggacattcaggctcaagggaaa
ccacagtgcctctgtctccgagccgagcaggcaacggtggtcatcggctcagagcatgga
ctggtggaggtagaccctgtcacgagagaggtgaaaaatgaaattcctttggtggcagaa
ggctttctcccagaggatggaagtggctgcatcattggtattcaggacttgctggatcag
gagtctgtgtgtgtggccacagcttctggagatgtcctgctttgtaatctcaacacacac
cagctggaatgtgtcgggagtgtagccagtggtatctctgtcatgagctggagtcctgac
caagagctggtgctgcttgccacaggccaagagaccctaattatgatgacaaaagacttt
gaacctatcatggaacagcaaatccaccaggatgattttggtgaaagcaagttcatcact
gttggttggggcaggaaggagacgcagttccatggatctgaaggcaggcaagcagctttt
cagatgcaaatgcacgaatctgctttgccctgggatgaccatagaccacaaattacctgg
cgtggtgatgggcagttttttgctgtgagtgttgtttgtccagagacaggggctcgaaag
gtcagagtgtggaaccgggagttcgctttacagtcaaccagtgagcccgtggctggactg
ggacctgctctggcttggaagccttcaggcagtttgattgcatctacgcaagataaacct
aatcaacaggatgttgtgttttttgagaaaaatggacttctccacggacagtttacactt
cctttcttcagagatgaggttaaggttaatggccttttctggaatgcagattccactgtg
cttgcagtttggctagaagaacttcagagggaagaaaattcatctctaaaaacctatgtt
cagctctggactgttggaaactatcactggtatctcaagcaaagtctgcccttcgacacc
tgtgggaagagcaagatcgtgtctctgctgtgggacccggtcagcccataccggctgcat
gttctctgtcaaggctggcactacctctgctatgactggcactggacgactgaccggagc
tcgggagataatctgagtgacatggcaaatgtggctgttatcgatggaaaccgggtactg
gtgacggtcttccggcagagtgtggttccgcctcccatgtgcacctaccggctgcagctc
ccgcactctgtaaatcaggtcatgttctcggcacgccctgaaaagagtaacgacctcgct
gtcctagacgccagcaaccagatttctgtttataaatgtggtgatagtccaagcatagac
tctacggtgaaactgggagctgtgggtggaaatggatttaaaatttcccttagaatgcct
catctggacaaaagatacaaaattccgattgaggacagtgaggctgaagaagtaaacccg
ctgaagctcagcctgctcgcctgggctcaggaagacacttttctggccgtcagccacagc
cagtccggcccccggtctgccgttcaccatctgactgtggccccttccgagacggacgac
gagcagggacagctcaacatcagttcatctgtgacagtggacggggtaataatcagtctg
tgttgcaaccccaagaccaagtcagtagccctgcaggtggctggtggccagatatttaag
tacctatgggagtcaccttctctggctgttgaaccgtggaagaaccctggtgggttccct
gttcggtttccttatccgtgcacgcagactgaattggccatgattggaggagaggaatgt
atccttggtctgactgacagatgtcgctttttcatcaacgacactgaggttgcatcaaat
atcacatcatttgctgtatatgatgagtttttattggtgacgactcattctcatacttgc
cagtgcttttgcctgagagatgcttcattgaaaacattgcaggcaggtctgagcagcagc
cacgtgcctaatggcgagtctctgcggaaggtggagaggggttcacgcatcgtcactgtt
gtgcctcaagacacaaagcttatattacagatgccaaggggaaacttagaagttgttcat
catcgagccctggttttagctcagattcgaaagtggttggacaaacttatgtttaaagaa
gcatttgaatgcatgagaaaactgagaattaatctcaatctgattcacgatcacaaccct
aaggtgtttcttgaaaatgtggaaaccttcataagacagatagactctgtgaatcatatt
aatttatttttcacagaattgaaggaagaagatgttacaaagaccatgtatcctccacca
gttcccagcactgttccactgtccagcgatcctgatgagaaaaaagtagaccttatctgc
gatgctatgagagcagccatggagaacataaaccctcacaagtactgcctgtcaatactc
acctctcacgtgaagaaaacgaccccagagctggagattgcactgcagaaggtacacgaa
cttcaaggaaatgctccaccagtccctgacgctgtgagtgccgaagaggccctgaagtat
ttgctgcttctggtagatgttaatgaattatatgaccattctcttgggacctatgacttt
gatttggtcctcatggtagctgagaagtcacagaaggatcccaaagaatatcttccattt
ctgaatacacttaagaaaatggaaatgaattatcagcggttcactatagataaacacttg
aagcgatatgaaaaagccattggccacctaagcaaatgtggaccggagtacttcccagaa
tgcttaaacttaataaaagataaaaacttgtataacgaagctctgaagctctacccaccg
aactcgcagcagtacaaggacatcagcattgcttacggggaacacctgctgcaggagcac
ctccatgagccggcagggctcatgttcgcccgctgcggtgcacacgagaaagctctcagc
gcctttctggcctgtggcagctggcagcaagcgctctgtgcagcagcccagcttcacctg
accgcagagcagctggctggcctgggcaggactctagcaggaaagctagttgagcagagg
aaacacagcgatgcagccacagttttggaacagtacgctcaggaccatgaagaagctgtg
ctcgtgctgttagaaggagctgcctgggaagaagctctgagactggtacacaagtataac
agaccagatattatagaaaccaacataaagccttccattctagaagcccagaaaaattat
atggtgtttctggactctcaaacagccacattcagccgccataaaaaacgtctgctggtg
gtacgagagctgaaggagcaggcccagcccgtgagcctggatgatgaagcgccccacggt
ccagagtcagacctcttctctgagaccagcagtaccatgagcggcagtaacttgagtggc
ggatactcacatagtaactcgaggatatcagcgcgatcatctaagaatcggcgcaaagcg
gagcggaagaagcacagcctcaaggaggggagtccactggaggatgtggcccttttggag
gcattgagtgaagtggtgcaggggactgagaaattgaaagatgaaatatgccatatttta
aagatgctctttctctttgagtttgatgagcaaggaagggaattacagaaggcctttgaa
gatactctgcagttaatggaaaggtcgcttccggaaatttggactctcaccccccagcag
agttcagctacatctgttctaggtcccaattctactgcaaatagtatcatggcctcttac
caacaacagaagacttcagttcctgttcttgatgctgagctttttatgccaccaaagatc
aacagaagaacccagtggaaactgagccttctagattga
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