Bubalus bubalis (water buffalo): 102407320
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Entry
102407320 CDS
T05912
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X9
KO
K22659
calsyntenin 1
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102407320 (CLSTN1)
Cell adhesion molecules [BR:
bbub04515
]
Cadherins
Cadherin related
102407320 (CLSTN1)
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
CDC45
Toxin_R_bind_N
FAM176
Glyco_hydro_16
EphA2_TM
Cadherin_C_2
V_ATPase_I
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
102407320
NCBI-ProteinID:
XP_025141646
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All DBs
Position
5:complement(37247368..37322688)
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AA seq
959 aa
AA seq
DB search
MLRRPAPALAPAAWLLLAGLLCSGGVWASRVNKHKPWLEPTYHGLVTESDSTVLLDPPLI
ALDKDAPLRFAGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSTEKLDCELQKDYTFTIQA
YDCGKGPDGANVKKSHKATVHIQVNDVNEYAPVFKEKSYKATVVEGKQYDSILRVEAVDA
DCSPQFSQICNYEIVTPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAED
VLVKISIKPTCTPGWQGWNNRVEYEPGTGALTLFPNVHLETCDESVASAQVVVELETSHI
GKGCDRDTYSEKSLHRLCGAASGTAELLPSPGGSWNWTIGLPTDNGHDSDQVFEFNGTQA
VRVPDSIVSVNPKEPFTISVWMRHGPFGKKKETIVCSSDKTEMNRHHYSLYVHGCRLVFL
LRQDPSEEKKYKPAEFHWKLSQVCDEEWHHYVLNVEIPSVTLYVDGVPHEPFSVTEDYPL
HPSKIETQLVVGACWQGGDLRMTQFFRGNLAGLTIRSGKLTDKKVIDCLYTCKEGLDLHT
PEDNGRGVKIQANPTQSMLTLEGEDVGELDKAMQHISYLNSRQFPTPGIRRLKITSTVKC
FNKATCISIPPVDGYIMVLQPEEPKISLSGIHHFARAASEFESSEGVFLFPELRIISTIT
REVEPEGEGDEDPTVQESLVSEEIVHDLDTCEVTVEGEELNGEQESLEVDAARLQQKGIE
MSSSDMGVVFTGVDTMASYEEILHLLRYRNWHTRSLLDRKFKLVCSELNGRYVSNEFQVE
VNVIHTANPMEHASHIAAQPQFVHPEHRSFIDLSGHNLANPHPFAAVLSPLAPVVPSTAT
VVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTITVNPMETYEDQ
HSSEEEEEEEEEESEDGDEEDDITSAESESSEEDEGEHGDPQTANRQQQLEWDDSTLSY
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcgcccgcgctggcccctgccgcctggctgctgctggccgggctg
ctctgcagcggcggggtctgggcctcgcgagtcaacaagcacaagccgtggctggagccc
acatatcatggcttagttacggagagcgacagcactgtgctcctcgaccccccactcatt
gccctggacaaagatgctcctttgcgctttgcaggtgagatttgtggatttaagattcat
ggacagaatgtgccctttgacgcagtggtggtggataaatccactggcgagggggtcatt
cgttccacagagaagctggactgtgagctgcagaaggactacacgttcaccatccaggcc
tatgactgcgggaaggggccagacggggccaatgtgaaaaaatctcacaaagcaactgtc
cacattcaggtgaacgacgtcaacgaatatgcgcccgtgttcaaggagaagtcctacaaa
gccacagtggtggaggggaagcagtacgacagcatcttgagggtggaggcggtggacgca
gactgctccccccagttcagccaaatctgcaactatgagatcgtcaccccggatgtgcca
ttcaccgttgacaaagatggttacattaaaaacacggagaagctgaactatggtaaagag
caccagtacaagctgactgtcacagcctacgactgcgggaagaaaagagcggcagaagac
gttttggtgaagatcagcatcaagcccacctgcacccctgggtggcaaggatggaacaac
agggtggaatacgagccgggcactggtgctctgacactctttccgaatgtccacctggaa
acgtgtgacgagtcggtggcctcggcacaggtggtggtggagctggagaccagccacatc
gggaagggttgtgaccgtgacacctactccgagaagtcacttcaccggctctgcggtgct
gcgtctggcacggctgagctgctaccttccccaggaggctcctggaactggactattggc
cttcccacggacaacggccatgacagcgaccaggtcttcgagttcaacggcactcaggca
gtgagggtcccagacagcatcgtctctgtcaaccccaaggagccctttacgatctctgtg
tggatgaggcatgggccatttggcaagaagaaggagacgattgtttgcagctcagacaaa
acagagatgaaccgacaccattactcactctatgtccatggctgccggctggttttcctc
ctccgtcaggatccttcagaagagaagaaatacaaacctgcagagttccactggaagctg
agtcaggtctgtgacgaggaatggcatcactacgtcctcaacgtggaaatccccagtgtg
actctctacgtcgacggtgtccctcatgagcccttctctgtcactgaagattacccactt
catccatccaagatcgaaacccagctcgtggttggggcttgctggcaaggtggtgacctg
cgtatgacccagtttttccgaggtaatctggctggcctgaccatccgttctgggaagctc
acagataagaaggtgattgactgtctgtatacctgcaaagaggggctagacctgcacacc
cccgaagacaatggcagaggtgtcaagatccaggccaaccctactcagtcgatgttgacc
ttggagggagaggacgtgggggagcttgataaggccatgcagcacatttcctaccttaat
tcacgacagttccccaccccagggatccgaagactcaaaatcaccagcacagtcaagtgt
tttaacaaggccacctgcatctccatccccccggtggatggctacataatggttttgcag
ccagaagagcccaagatcagtctgagcggcatccaccattttgctcgagcggcttccgaa
tttgaaagctcggagggggttttcctcttccccgagcttcggatcatcagcaccatcacg
agagaagtggaacccgaaggggaaggggatgaggacccaacagttcaagagtcactggtg
tcagaggagatcgtgcacgacctggacacctgtgaggtcacagtggagggagaagaactg
aatggagagcaggagagcctggaggtggacgcggcccgcctgcagcagaagggcatcgaa
atgagcagctctgacatgggcgtggtcttcacaggtgttgacaccatggccagctatgag
gagatcttacacctactgcgctatcggaactggcacaccaggtccttgcttgaccgcaag
ttcaagcttgtctgctctgagctgaatggtcgctatgtcagcaacgagttccaggtggag
gtgaatgtcatccacacagccaaccccatggagcacgccagccacatagctgcccagcca
cagttcgtccaccccgagcaccgctccttcattgacctctcgggtcacaacctggccaac
ccccacccgtttgcagccgtcctgtctcctcttgccccagtcgtgcccagcacggccacc
gtcgtcatcgtggtgtgcgtcagcttcctggttttcatgatcatcctgggggtgttccgg
atccgggctgcacaccagagaaccatgcgggaccaggacaccgggaaagagaatgagatg
gactgggatgactctgccctgaccatcaccgtgaaccccatggagacatacgaggaccag
catagcagtgaggaggaagaggaggaggaggaagaggagagcgaggatggggacgaggag
gacgacatcaccagtgctgagtcggagagcagtgaggaggacgagggggagcacggggac
ccgcagaccgcgaaccggcagcagcagctggagtgggacgactccaccctcagctactga
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