Bubalus bubalis (water buffalo): 102407375 Help Entry 102407375         CDS       T05912                                  Symbol ATG4D Name (RefSeq) cysteine protease ATG4D   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub04136   Autophagy - other bbub04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:bbub00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     102407375 (ATG4D)    04136 Autophagy - other     102407375 (ATG4D)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:bbub01002]     102407375 (ATG4D)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bbub04131]     102407375 (ATG4D)    03029 Mitochondrial biogenesis [BR:bbub03029]     102407375 (ATG4D) Peptidases and inhibitors [BR:bbub01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    102407375 (ATG4D) Membrane trafficking [BR:bbub04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     102407375 (ATG4D) Mitochondrial biogenesis [BR:bbub03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     102407375 (ATG4D) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  102407375 NCBI-ProteinID:  XP_006068421 LinkDB All DBs Position 9:complement(96128163..96136848) Genome browser AA seq 472 aa AA seqDB search MNSVSPAAAQYRSGSPEDARRPEGRRPRGPRTPDPNSLGPSGASGPALASPGTGPGEPDE VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFEGEGDIQRFQRDFVSRLW LTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWCQGAGLGPTEPPG LGSPSRRRGPARWLPPRWAQAPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKK AGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVVI LVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP TVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSAT ERYPMFTLVEGHAQDHSLDDLCSPPSQQTLRIPRSGRLLKAKRPSSEDFVFL NT seq 1419 nt NT seq  +upstreamnt  +downstreamnt atgaactccgtgtcgccggccgccgctcagtaccggagcgggagtccggaggacgcgcgc cgcccggagggccgcaggccgcggggaccccgaaccccggaccccaacagcctggggccc tccggagctagcggccccgctcttgcatcgcccgggaccggccccggagagccggacgaa gtggacaagtttaaggcgaagttcctgaccgcttggaacaacgtcaagtacggttgggca gtcaaaagccggaccagctttagcaagatctccagtgtccatctctgtggccgccgctac cgcttcgagggcgagggtgacatccagcgtttccagcgggactttgtatctcgcctatgg ctcacataccgccgggacttcccacccctcgcgggaggcagcctgacctcagactgtggc tgggggtgcatgttacgaagtgggcagatgatgctggctcagggccttctgcttcatttc ctgcccagagactggacgtggtgccagggcgcaggtctgggccccactgagcctccaggg ttgggctctcccagccgacgccgggggcccgcgcggtggctgcctccgcgctgggcccag gcccctgagctggagcaggagcgccggcaccggcagatcgtgtcctggttcgctgaccac ccccgggcccccttcggcctacaccggctggtggagctggggcagggctcaggcaagaag gcaggcgactggtatgggccgtctctggtggcacacatactcaggaaagcggtggagagc tgctcggaggtcacccgcctggtggtgtacgtctctcaggactgcacagtatacaaggcg gatgtggcacgcctggtggcccggccagaccccacggctgaatggaagtccgtggtcatc ctggtaccagtgcggcttggtggagaaactctcaaccccgtgtacgtgccctgcgtgaag gagctccttcgttcagagctgtgcctgggtattatgggcggcaagccccgccactcgctg tacttcatcggctaccaggatgacttcctgctctacctggacccgcactactgccagccc accgtggatgtcagccaggccgacttcccgctggagtccttccactgcacctcaccccgc aagatggcctttgccaagatggacccgagctgtaccgtgggcttctatgctggagacaga aaggagtttgagacgctctgctcagagctgaccagggtcctcagctcctcctcagccaca gaacgataccccatgttcaccctcgtcgagggccacgctcaggaccacagcctggatgac ctgtgctccccgccctcccagcagacactgcggatccctcgcagtggccggctcctcaag gctaaacgcccaagctctgaggactttgtgtttttataa

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