Bubalus bubalis (water buffalo): 102407579
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Entry
102407579 CDS
T05912
Symbol
MSX1
Name
(RefSeq) homeobox protein MSX-1 isoform X1
KO
K09341
homeobox protein MSX
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102407579 (MSX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102407579 (MSX1)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
102407579 (MSX1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
102407579
NCBI-ProteinID:
XP_044801582
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All DBs
Position
7:13331603..13335947
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AA seq
306 aa
AA seq
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MAPAADMTSLPLGVKVEDSAFGKPAGGGGGQTPSTTAATAAAMGADEEGAKPKVSPSLLP
FSVEALMADHRKPGAKDSVLAASEGAQAAGGSAQPLGARPGSLGAPDAPSSPRPLGHFSV
GGLLKLPEDALVKAESPEKPERTPWMQNPRFSPPPASPSGRLSPPACTLRKHKTNRKPRT
PFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEK
LKMAAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYGASGPFQRAALPVAPVGLYTAHVGY
SMYHLT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggccccggctgctgacatgacttctttgccactcggtgtcaaagtggaggactccgcc
ttcggcaagccggcggggggcggcggaggccagacccccagcaccaccgcggccacggcg
gccgccatgggcgcagacgaggagggggccaagcccaaagtgtccccttcgctcctgccc
ttcagcgtggaggcgctcatggccgatcacaggaagcccggggcgaaggacagcgtcctg
gcggcctcggagggcgcacaggcggcgggcggctccgcgcagcctctaggtgcccggccg
gggtcgttgggcgccccggatgcgccgtcctcgccgcggccgctcggccatttctcggtg
ggaggactcctcaaactgccagaagatgcgctcgtcaaagccgagagccccgagaaaccc
gagaggaccccgtggatgcagaatccccgcttctccccgcccccggccagcccctcaggg
cggctgagtcctccggcctgcaccctgcgcaagcacaagaccaaccgcaagccgcggacg
cccttcaccaccgcccagctgctggcgctggagcgcaagttccgccagaagcagtacctg
tccatcgccgagcgcgccgagttctccagttcgctcagcctcaccgagacgcaggtgaag
atctggtttcagaaccgccgcgccaaggccaagagactgcaggaggccgagctggagaag
ctgaagatggccgctaaacccatgttgccccccgcagccttcggcctctccttcccactg
ggaggccctgccgccgtagcagccgccgcgggcgcctcgctctacggggcctctggccct
ttccagcgcgccgcgctgcccgtggcgcccgtgggactctacacagcccacgtgggctac
agcatgtaccacctgacatag
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