Bubalus bubalis (water buffalo): 102407695
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Entry
102407695 CDS
T05912
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102407695 (CTR9)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
102407695 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
102407695
NCBI-ProteinID:
XP_006046048
LinkDB
All DBs
Position
16:43509223..43533206
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AA seq
1173 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPATQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFDEFVNDDTDEDLPVSKKKKRRKGSGSEQEGEEEEGGERKKKKR
RRPPKGDEGSDDDETENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSHSNSDSDEGERRKKGASSESESDENQNKSGSEAGSPRRSRRSH
SDEDSDSDQPARKRRPSGSEQSDNESLQSGRSRSPGSEMDSRPASPSAESDHDSERASDN
EGSGPGSGNESEPEGSNNEASDRGSERGSDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctctattgagattccccttcgggacactgacgaggtcattgaacttgat
tttgatcagttaccggagggagatgaagttattagtattctgaaacaggaacacacacaa
ctgcacatatggattgctttggcgctggaatactacaagcaagggaaaacagaagagttt
gtcaagttgttggaagcagcacgtatagatggcaatttggattacagagaccatgaaaaa
gaccagatgacttgcttggatacattggcagcctattatgttcaacaggctcgtaaggaa
aagaataaggacaacaagaaggatcttattacacaggcaaccctattgtatacaatggca
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgccttctt
gaaggtgacaaaatggatcaagctgatgcacagtttcattttgtactcaaccagtctcca
aataatattccagcactgcttggtaaagcttgcatttcgtttaacaagaaggattacaga
ggcgctctagcttactataagaaagccttgcggactaacccaggttgtccagcggaagtt
cgtttaggaatgggccattgctttgtgaaacttaacaaactggagaaagctcgtctggca
ttcagcagagccctggaactcaattccaagtgtgtgggagcattggtgggactggctgtt
ctagaactcaataataaagaggctgattcgatcaaaaatggtgtccagcttctttccaga
gcctatacaattgatcctagcaaccctatggtattaaaccacttagcaaatcactttttc
tttaaaaaggattacagtaaagtccagcacttggcgctccatgcattccataatacagaa
gtggaggccatgcaagcagaaagttgctatcagttggctagatcattccatgtccaggaa
gattatgaccaagctttccaatactactatcaagctacacagtttgcctcatcctctttt
gtgctgcctttttttggtttgggacaaatgtacatttatcgaggtgacaaagagaatgca
tctcagtgctttgagaaagttttgaaagcttatcctaataattatgaaactatgaaaatt
cttggctctctatatgctgcttcagaagaccaagaaaaaagagatattgccaagggccat
ttgaagaaggtcacagaacagtatcctgatgatgttgaagcttggattgagttggcacag
atcttagaacagactgatatacagggtgccctgtcagcctacggaacagcaacacgcatc
cttcaggagaaagtgcaggccgatgtccccccagagattctgaataacgtgggtgccctt
catttcagacttggaaatctgggtgaggcaaagaaatactttttggcatctttggatcgt
gcaaaggcagaagccgagcatgatgaacattattataacgccatttctgttacaacgtca
tacaatttagccaggctgtatgaagcgatgtgtgaattccatgaagctgaaaaactatat
aaaaacatcttacgggaacatcctaattatgttgactgctatctgcgcctaggagcaatg
gctagagataaaggaaacttttatgaggcttcagattggtttaaggaagctcttcagatt
aatcaggaccatccagatgcttggtctttgattggtaatcttcatttagcaaaacaagaa
tggggtccaggccagaagaaatttgagaggatattaaaacaaccagctactcagagtgac
acttattctatgctggcccttggcaacgtctggcttcagactttgcatcagcccacccga
gatagagaaaaggaaaagcgtcatcaggatcgtgctctggctatctacaaacaagtactc
agaaatgatgcaaagaatctatacgctgctaatggcataggagctgttttggcccacaaa
ggatatttccgtgaagctcgtgatgtatttgcccaagtaagagaagcaacagcagatatc
agtgatgtgtggctgaacctagcacacatctacgtggaacaaaagcaatatatcagcgct
gttcagatgtatgaaaactgcctcagaaagttttataagcaccagaacacagaagttgtg
ctatatttggcccgggccctcttcaaatgtggcaagttacaggaatgcaaacaaaccctg
ctgaaggctagacacgtggcacccagtgatacagttcttatgtttaatgtggccttggtc
ctacaaagattagctacctctgtcctgaaagatgaaaagagtaatctgaaggaagtactt
aatgctgtgaaggaactggagctcgcacacagatatttcagttacttgagtaaagtggga
gataaaatgagatttgatttggccctcgctgctacagaagccaggcaatgctctgactta
ctgagccaggcgcaataccacgtggcccgggcacgcaaacaagacgaagaagaaagggag
ttgcgggccaaacaggaacaagagaaagaactgctaaggcagaaacttctcaaagaacag
gaagagaaacgtctcagagaaaaagaagagcaaaagaaacttttggaacagcgggcccag
tatgtagaaaagaccaaaaatattcttatgtttactggagagactgaagcaacaaaagaa
aagaaaagaggtggtggtggtggacggcgttccaagaagggaggagagtttgatgaattt
gtcaatgatgacaccgatgaggacctgcctgtctccaaaaagaagaagcgaaggaagggc
agtggtagtgagcaggaaggcgaggaagaggagggcggcgagagaaagaagaagaagagg
agaagacctccgaagggagatgaaggatctgatgatgatgaaacagaaaatggccccaaa
ccgaaaaagcgccgtccaccaagagcagagaagaagaaggctcccaagccagaacgtctg
cctccttcaatgaagggaaaaataaaatccaaagccataatatcatcaagtgatgattcg
tctgatgaagataaactgaaaattgctgatgaagggcatccccgcaacagccacagcaac
agcgactcggatgagggcgagcggcggaagaagggtgcctcctcggagagcgagtctgac
gagaaccagaacaagtccggcagcgaggccggcagcccccggcggtcccggagatcccac
tccgatgaggattcggacagcgaccagccggccaggaagcgcaggccctcaggctccgaa
cagtcggacaacgagtccctgcagtctgggcggagccgctccccaggctctgagatggac
tcccggcccgcgtccccgagtgccgagtcggaccacgattccgaaagagcctctgacaat
gagggctccggcccaggttccggaaatgaatctgaacccgaggggtccaacaacgaggcc
tcggataggggctcagaacgcggttcagatgatagcgactag
DBGET
integrated database retrieval system
