Bubalus bubalis (water buffalo): 102407849
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Entry
102407849 CDS
T05912
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbub03016
]
102407849 (TRUB1)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
102407849 (TRUB1)
Transfer RNA biogenesis [BR:
bbub03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102407849 (TRUB1)
Prokaryotic type
102407849 (TRUB1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
102407849
NCBI-ProteinID:
XP_025129674
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All DBs
Position
23:35377380..35410291
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AA seq
378 aa
AA seq
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MAAVEAAAVVVSSCLKPDPVPVPESAGTAAATAATSSAMAAAAVVAAAARTGSEARVSKP
ALATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGT
LDSAARGVLVVGIGRGTKMLTSMLSGSKRYVAIGELGKATDTLDSTGNVTEEKPYDKITQ
EDIESILQKFTGNIMQVPPLIILSRFLNLSLFLLPSSLFVSLFYFASYSALKKDGQRLST
LMKRGEVVEAKPARPVTVYSLSLQKFQPPFFTLDVECGGGFYIRSLVSDIGKELSSCANV
LELTRTKQGPFTLEEHALPEDKWTIDDIAQSLERCSSLLPAELALKKSKPEESNEQVLSC
EYITLNETKGEDDVIKTL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgttgaggcggcggcggtggtggtgtcgtcctgtttgaaaccagacccagtc
ccagtccccgaaagtgcagggacagctgcagcaacggccgccacatcctcagcgatggct
gcagccgcggtcgttgcggccgcggccaggaccggatccgaagccagggtctccaagccc
gcgttggctactaagctgctgtccctgagcggcgtgttcgctgtgcacaagcccaaaggg
cccacttcagccgagttgctgaatcggctgaaggagaagctgctggcagaagctggaatg
ccttctccagaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggacc
ctagacagtgcagcccgaggagtcctggtggttggaattggaaggggaacaaaaatgttg
accagtatgttatcagggtccaagagatatgttgccattggggaactggggaaggctact
gacacgctagattctacagggaacgtaacagaagaaaaaccttatgataaaataacacaa
gaagatattgaaagcattctacagaaattcactgggaatataatgcaagtacctccccta
attattctctctcgctttctcaatctctctttattcttgctcccttcttctctctttgtc
tccctcttctactttgcaagctattctgcattaaagaaagatggccagagactttcaact
ttgatgaagagaggtgaagtagtagaagcaaagcctgccaggccagttactgtatacagt
ctctcccttcagaaattccagccaccatttttcacactagatgtcgaatgtggaggaggt
ttttatatcagaagcttggtcagtgacattggcaaagaactctcttcctgtgccaatgtg
ctagagctgacgcgaaccaaacagggaccattcaccctggaggagcatgccctgcccgaa
gacaaatggacgattgatgacattgcacagtctctcgagcggtgctcatctcttctccca
gcagagctggcacttaaaaaatcaaaacctgaggagtctaatgagcaagttttgagctgt
gagtatataactctgaatgagacaaagggagaagacgatgtaattaagacactttaa
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