Bubalus bubalis (water buffalo): 102407975
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Entry
102407975 CDS
T05912
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31 isoform X2
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbub01009
]
102407975 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbub03009
]
102407975 (DDX31)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102407975 (DDX31)
Protein phosphatases and associated proteins [BR:
bbub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102407975 (DDX31)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
Pre-60S particles
Helicases
102407975 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
102407975
NCBI-ProteinID:
XP_044782419
LinkDB
All DBs
Position
12:complement(102061030..102134580)
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AA seq
706 aa
AA seq
DB search
MAAVSGVLPQVPEPRAAVFRTFSKPRPAHARRQAAATKRKCQASSEAPPAKRRSKASFLP
AKKTAAKETRRTLKGKSQRTFSPKKPSAGARDGDQERKPGAKTSSLFKNNPEIPELPRPV
VKQVQEKVFTSDAFQALDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTG
SGKTLAYCIPVVQSLQAMQSKIQRGDGPYALILVPTRELALQSFDTVQKLLKPFAWIVPG
VLMGGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFRQIRWLILDEADRILDLGF
EKDLTVILNAVNAECQERQNVLLSATLTEGVARLADISLHDPVSISVLDESHDVSSPESE
AFLEASPPQATDELDGFAIPAGLEQHVVVVPSKLRLVCLAAFILQKCKFERDQKVIVFFS
SCELVEFHYTLFLQTLLSGSGALAPEHLPSTSTPLKFLRLHSALEQEERTAVFQDFTHSK
TGILFCTDIAARGLDLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLVLAPSEAE
YVNSLASHKINVSEVKMEDILSVLTKDDCFKGRRGGGQKSRAAGPQEIRERATVLQTLFE
DYVHSSEETVSGAKKALQSFIRAYATYPRELKHIFHIRLLHLGHMAKSFGLRDAPKNLCA
SAMKKKKANLKRPDLQRKKTQSKQRLAEILRSEYASGMETGGAKIT
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagtcagcggagtgcttcctcaggtccccgagccccgggccgcggtcttcagg
accttctccaaaccccgcccggcccacgcgaggcggcaagcagcggccaccaaaagaaaa
tgccaggcgtccagcgaggctcccccagcgaaacggaggagcaaagcctcttttctcccg
gccaagaaaactgccgctaaagaaactcgcaggaccctgaaggggaagtcacagaggacg
ttttctcccaagaagccctcagccggcgcgagggatggagaccaggagcggaagccgggc
gccaagacttcatcactgttcaaaaacaaccctgagatcccggaactccccagacctgta
gtaaagcaggtgcaagaaaaggtgtttacttcagatgcttttcaagccctggacctccac
ccacatctcatttccacaataaatacagtcttaaaaatgtctagtatgaccagtgttcag
aagcagagcatccccgtgttgctggaaggcagagatgccctcgtgcgatcccagacgggc
tcaggtaaaactcttgcctattgcatccctgtggtccagtctcttcaagcaatgcaatcc
aaaatacagcgtggtgatggcccctacgctctgatactagtgccaacaagagagctggct
ctgcaaagctttgatactgtccagaaactgcttaagccgtttgcctggattgtgcctgga
gtgttaatgggaggagagaagagaaaatcagaaaaggccaggctccgaaaaggaataaat
atccttatctccactcctgggcgccttgtggatcatataaaatccaccaagaacatccat
ttccgtcagatccgttggctgattctggatgaagcagacagaatcttggatttgggtttt
gaaaaggacctcacggtgatcctcaacgctgtgaatgccgagtgccaggaacgacagaat
gtcttgctgtcggcgacgctcacggaaggtgtagcacggctagctgacatcagtttacac
gaccctgtcagcatctctgtcctggatgaaagccatgatgtgtctagcccggagagcgaa
gcctttctcgaagcttctcctccacaggcgactgatgagctggacggcttcgccatccca
gccggtctcgagcagcatgtggtggtggtccccagcaagctgagactcgtctgcctggcg
gccttcattctgcagaagtgcaagtttgagagagaccagaaggtgatcgtcttcttctca
agttgcgagctggtggagttccactacaccctcttcctccagaccctgctgagcggctct
ggggccctggccccagagcatttgccatccacctccacgccgttaaaatttctgcggctg
cacagcgccctggagcaagaggaaagaacagcagtgtttcaagatttcacgcattccaaa
acaggcattcttttttgcacggatattgcagctcggggcttggatctccctcaagtcaca
tggattgtccagtacaacgctccgtcttcacctgccgaatacatccaccggattgggaga
acggcccggattggctgccatgggagcagcctgctcgtcttggctccttcggaggcagaa
tatgtcaactcgttggcttctcacaaaatcaacgtttctgaggtgaagatggaagacatt
ttgtctgttctgacaaaggatgattgttttaaggggagacgagggggaggccagaagtcc
cgcgctgctggcccccaggaaatccgggaacgagccacagtcttgcagacgctgtttgaa
gattacgtgcactccagtgaggagacggtctccggggccaagaaagccctgcagtccttc
atccgggcctatgccacctacccccgggagctgaagcatatcttccacatccgactgctc
cacctcgggcacatggctaagagctttgggctaagagatgcccctaaaaatctttgcgcc
tcggccatgaagaagaagaaagcaaacctgaaaaggcctgaccttcagaggaagaagacc
cagagtaagcagcgcctggctgaaatcttgcgttccgaatatgccagcgggatggagacc
ggcggtgccaagatcacatga
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