Bubalus bubalis (water buffalo): 102408005
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Entry
102408005 CDS
T05912
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X3
KO
K06171
nicastrin
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04330
Notch signaling pathway
bbub05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102408005 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102408005 (NCSTN)
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Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
102408005
NCBI-ProteinID:
XP_044800070
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Position
6:complement(9453549..9467775)
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AA seq
592 aa
AA seq
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MATAGGSCVADPGSRSLLRLLSFCVLLAGIYSNSYGSQFAHCRAFQWNKVGDGLAYEDFS
FPIFLLEDENETNVIKQCYRDHNLSPNGSAPAFPLCAMQLFSHMHAVVSTVTCMRRSLIQ
SSFSISPEIVCDPLSDYNVWSLLKPINTSGTLEPDDRVVVAATRLDSRSFFWNVAPGAES
AVASFVTQLAAAEALQKAPDADTLPRNVMFVFFQGETFDYIGSSRMVYDMENGKFPVQLE
NIDSFVELGQVALRNSLELWMHTDPMSQKNETVLNQVEALLSTLEQSGAGVPTVVLRRLN
QSQPLPPSSLQRFLRARNVSGVVLADHSDSFHNLYYQSIYDTAENINVTYPAGQSPEEDL
NFVTDTAKALAGVATVLARALYRLAGGASFNDTIQADPHTVTRLLYGFLVRANNSWFQSI
LRPDLRSYLGDGPLQHYIAVSSPTNATYVVQYALANLTGKVMDLTREQCQDPSQVPNENK
DLYEYTWVQGPLNANETDRLPHCVRSTARLARALSPAFELKQWGSTEYSTWTESRWKDIR
ARIFLIASKELEFITLIVGFGILVFSLIVTYCINAKADVLFITPREPGSVSY
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgctgggggcagctgtgtggctgacccgggaagtaggagtcttcttcgcctt
ctgtctttctgcgtcctactggcaggtatttattccaactcttatgggtcacagtttgct
cactgcagagcctttcagtggaacaaggtgggcgatggcttggcttatgaagacttcagt
ttccccatctttcttcttgaagatgaaaatgaaactaatgtcattaagcagtgctaccga
gatcacaacctgagtccgaacggctcggcgccggccttcccgctgtgcgccatgcagctc
ttctcacacatgcacgctgtcgtcagcaccgtcacctgcatgcggcgcagcctcatccag
agctcattcagcatcagcccagaaatcgtctgcgaccccctgtccgactacaacgtgtgg
agcctgctgaagcctataaacacatctggaacgctggagcccgacgacagggtggtggtg
gctgccacccgactggacagccgttcttttttctggaacgtggccccaggggctgaaagc
gccgtggcctccttcgtcacgcagctggccgcagccgaagccctacagaaggcgcctgat
gcggacaccctgccccgcaacgtcatgtttgtcttcttccaaggggaaacttttgactac
attggcagctcgagaatggtctacgacatggagaatggcaagtttcctgtgcagctagaa
aacatcgactcgtttgtggagctgggacaggtggccttaagaaactcactagagctttgg
atgcacaccgaccccatgtctcagaaaaatgaaactgtactaaaccaggtggaggcgctc
ctgagcaccctggagcagagtggcgctggtgtccccaccgtggtcctcaggaggctgaat
cagtcccagcctctgccaccgtcttctctgcagcgatttcttcgagcgcgaaacgtctct
ggcgttgttcttgctgaccactctgattccttccataacctctattaccaaagcatttac
gacactgctgagaacattaatgtgacctaccctgcagggcagagccctgaagaggacctg
aactttgtgacagacactgccaaggctctggcaggtgtggccacggtgctggcacgcgcc
ctgtaccggctcgcaggaggagccagcttcaatgacaccatacaggctgatccccacacg
gttacccgcctgctctatgggttcctggttagagccaacaactcatggttccagtctatc
ctcaggccggacctcaggtcctacctgggtgatgggcctcttcagcattacatcgccgtc
tccagccccaccaacgccacttacgttgtacagtatgccttggccaacttgactggcaag
gtgatggaccttacccgagagcagtgccaggacccgagtcaagtccccaatgaaaacaag
gatctgtacgagtacacctgggttcagggccctttgaacgccaatgagacggaccgactc
ccccactgtgtgcgttccacggcacgcctggccagggccttgtcccctgcctttgaactg
aagcagtggggctctaccgaatactcgacgtggaccgagagccgctggaaagacatccgc
gcccggatatttctgatagccagcaaagagctggagtttatcaccctgatagtgggcttc
ggcatcctcgtcttctctctcatcgtcacctactgcatcaatgccaaagccgatgtcctt
ttcatcactccccgggaaccaggatctgtgtcttactga
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