Bubalus bubalis (water buffalo): 102408020
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Entry
102408020 CDS
T05912
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
bbub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102408020 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
102408020 (EIF4A3)
03015 mRNA surveillance pathway
102408020 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102408020 (EIF4A3)
03041 Spliceosome [BR:
bbub03041
]
102408020 (EIF4A3)
03009 Ribosome biogenesis [BR:
bbub03009
]
102408020 (EIF4A3)
03012 Translation factors [BR:
bbub03012
]
102408020 (EIF4A3)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102408020 (EIF4A3)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102408020 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
102408020 (EIF4A3)
Spliceosome [BR:
bbub03041
]
Complex C
Other components
EJC/TREX
102408020 (EIF4A3)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
90S particles
Helicases
102408020 (EIF4A3)
Translation factors [BR:
bbub03012
]
Eukaryotic type
Initiation factors
eIF-4
102408020 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
102408020
NCBI-ProteinID:
XP_006064209
LinkDB
All DBs
Position
3:complement(10827566..10839253)
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacggccacgatggcgacctcgggttcggcgcggaagcggctactcaaagag
gaagacatgaccaaagtggaattcgagactagcgaggaggtggacgtgacccccaccttc
gacaccatgggcctgcgggaggacttgctgcgcggcatctatgcctacggttttgaaaaa
ccatcagcaatccagcagcgagctatcaagcagataattaaaggaagagatgtcattgcg
caatctcagtctggtacaggcaaaacagccaccttcagtatttctgtcctccagtgtctg
gatattcaggttcgtgaaacccaagctttgatcttggctccaacaagagagttagctgta
cagatccagaagggcctgcttgctctgggtgactacatgaatgtccagtgccatgcctgc
atcgggggcaccaatgtgggggaggacatcaggaaattggactacggacagcacgttgtc
gctggcacacctgggcgtgtcttcgatatgattcgtcgcaggagtttgaggacacgtgct
atcaagatgttggttttggatgaagctgatgaaatgttgaataaaggtttcaaagaacag
atctacgacgtgtacaggtacttgcccccagccacacaggtggtgctcatcagtgccaca
ctgccccatgagatcctcgagatgaccaacaagttcatgactgaccccatccgcatcttg
gtaaaacgtgatgaactgactctcgaaggcattaagcagttttttgtggctgtggaacgg
gaagagtggaagtttgacaccctgtgtgacctctacgacacgctgaccatcacacaggct
gtcatcttctgtaacaccaagaggaaggttgactggctgacggagaagatgagggaagct
aactttaccgtgtcatccatgcatggggacatgccccagaaggagcgagagtccatcatg
aaggagttccggtcaggtgccagccgagtgctcatttctacagacgtctgggcccggggg
ctggacgtgccccaggtgtccctcatcattaactatgacctgcccaacaacagagagctg
tacatacacagaattgggcgatcaggtcgatatggccgaaagggtgtggccattaatttt
gtaaagaatgatgatatccgcatcctcagagacatcgagcagtactactccactcagatt
gatgagatgcccatgaacgttgctgatctgatctga
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