Bubalus bubalis (water buffalo): 102408147
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Entry
102408147 CDS
T05912
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102408147 (NUP58)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102408147 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102408147 (NUP58)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102408147 (NUP58)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
NET2A_C
PSY3
Nup49_C
GAIN_ADGRA3
Motif
Other DBs
NCBI-GeneID:
102408147
NCBI-ProteinID:
XP_006071014
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All DBs
Position
13:55790460..55820941
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AA seq
586 aa
AA seq
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MSTGFSFGSSTLGSSTVAAGGSSTGGGFSFGTGTSSNPTVGLNFGTLGSTATPATTSASG
GFGTSLFGSKPATGFTLGGTTTGTAATTSASTIGFSLGFSKPAASATPFSLPIASTSASG
LTLSSALTSTPAASTGFTLNNLSGTAATTTTASTGLSLGGALTGLGGSLFQGTSTATSGL
GQSALGLTLGTTAATSAAGNEGLGGIDFSSSSDKKSDKTGTRPEDSKALKDETLPAVICQ
DVDNLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRNTLNIDKLKI
ETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQYRQQIEELENHLAT
QANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFE
ARRAEAKKWQNAPRVTTGPTPFSNMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGAPFG
SGIGTGLQSSGLGSSNLGGFGASSGFGCSTTGASTFGFGTTNKPSGSLSAGFGSSSTSGF
NFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagggttctccttcgggagcagcacgctgggttcctccaccgtggccgctggc
gggagcagcacgggcggaggtttctccttcgggaccgggacgtccagcaaccctactgtg
gggctcaattttgggacccttgggagcaccgccactccagctacaacatctgcttctggt
ggatttggaaccagcctcttcggatctaaacctgccacggggttcactctgggaggaacg
accacaggaacggcagccacgacatctgcatctacgataggcttcagtttaggcttcagc
aaacccgcagcgtccgccacgcccttttcgctgcccatcgcctctacctcggccagcggt
ctcacgctctcgtctgcactgacatccactcctgcagcatccacaggatttaccctgaat
aacttgagtggaacagcagccacaactaccactgcctcgacgggcctctctttagggggg
gccttgactggtttgggaggctcacttttccaaggtacaagcacagcaacatcaggactt
ggacaaagtgctttaggcctgactctgggaactacagcagctacttcagctgctggcaat
gaaggcctcggaggtatagattttagtagctcatcggataagaagagtgataaaacagga
acaagaccagaggacagtaaagcactgaaggatgagactctgcctgctgtcatctgccag
gacgttgacaacctccagaaatttgtgaaggaacaaaaacaggttcaagaagaaattagt
agaatgtcttcaaaagcaatgcttaaagtccaggaagatattaaagctctgaagcagctt
ttgtcactggctgccagtggattgcagaggaacacgctcaatattgacaaactgaaaata
gaaaccgctcaggagttaaaaaatgctgaaatagctttaagaacccagaaaacaccacct
ggattgcaacatgaaaatacagctcctgctgactacttcaggatcctggttcagcagttt
gaggtgcagctccagcagtacagacagcagattgaggagctggagaaccatctagccacc
caagcgaacaattcacacatcaccccacaagatttgtcaatggctatgcagaaaatttat
caaacatttgtagctttagctgcacagcttcagtctattcatgaaaatgtgaaggtgctg
aaagaacagtaccttggctacaggaaaatgttcttgggagatgctgtggatgtgtttgaa
gccaggcgagcagaagccaagaagtggcagaacgcaccccgagtcactactggacccacc
cccttcagcaacatgccaaacgcagcagccgttgccatggctgcaactcttacacagcag
cagcagcctgctacagggccacagccatctctgggagttagttttggagcgccattcggc
tcaggtattggcactggcttgcagtcaagtggcctaggttcttcaaaccttggaggcttt
ggagctagctctggttttggatgcagcaccacaggggcctccacatttggatttggaaca
acaaataaaccctcaggaagtcttagtgcaggctttggcagctcaagtacatctgggttt
aacttcagcaatcctggcatcacggcatcagcgggtttgacatttggggtgtccaatcct
gcctctgcaggctttgggacaggaggacaactccttcagttgaagaaacctccagctgga
aacaaaagaggaaaaagataa
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