Bubalus bubalis (water buffalo): 102408219
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Entry
102408219 CDS
T05912
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03082
ATP-dependent chromatin remodeling
bbub04714
Thermogenesis
bbub05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102408219 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102408219 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102408219 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102408219 (SMARCD2)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102408219 (SMARCD2)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102408219 (SMARCD2)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102408219 (SMARCD2)
PBAF complex
102408219 (SMARCD2)
GBAF(ncBAF) complex
102408219 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
102408219
NCBI-ProteinID:
XP_006041690
LinkDB
All DBs
Position
3:14965194..14974770
Genome browser
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGAPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDTAGTTGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcg
gttgccgcggccctgggagcgccgcctccgccggcgggacccggcatgctgcccggaccg
gcgcttagggggcccgggccggctggaggcgtgggggcccccggggccgctgccttccgc
cccatgggccccgcgggcccggcggcgcagtaccagcggcctggcatgtccccagggagc
cggatgcccatggctggcttgcaggtgggaccccctgccggctccccctttggcacagct
gctccacttcgacctggtatgccacccaccatgatggacccattccgaaaacgcctgctt
gtgcctcaggcccagcccccgatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaagttctacctcagcgaattcgggagcttgttccagagtctcaggcgtacatg
gacctcttggcttttgaacggaagctggaccagaccattgctcgaaagcggatggagatc
caggaggccatcaaaaagcctctgacgcaaaaacgaaagctgcggatctatatttccaat
acattcagtcccagcaaggcagaaggtgacactgcaggaaccacagggacccccggagga
acccctgcaggggacaaggtggcttcctgggaactccgagtagagggaaaactgctggac
gatcctagtaaacagaagcggaagttttcttccttctttaagagcctcgtcatcgagctg
gacaaggaactgtacgggcctgacaaccacctggtggagtggcaccggatgcccaccacc
caggagacagacggcttccaggtgaaacggcccggagacctgaacgtcaagtgcaccctc
ctgctcatgctggatcatcagcccccgcagtacaagctggacccccgcctggcgaggctg
ctgggggtgcacacgcagacgagggctgccatcatgcaggccctgtggctctacatcaaa
cacaaccagctgcaggacggccacgagcgcgagtacatcaactgcaaccgctacttccgc
cagatcttcagctgcggccgactacgtttctctgagattcccatgaagctggcggggctg
ctgcagcatccagaccccattgtcatcaaccatgtcatcagcgtggaccctaacgaccag
aagaagacagcctgttatgacattgatgtggaggtggatgacccgctcaaggcccagatg
agcaattttctggcctctaccaccaatcagcaggagatcgcctcccttgatgtcaagatc
cacgagactattgagtccattaaccagctgaagacccagagggatttcatgctcagtttt
agcactgacccccaggacttcatccaggagtggctccgttcccagcgccgggacctcaag
atcatcactgatgtgattgggaacccggaggaggagagacgagcagctttctaccaccag
ccctgggcccaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaatccgcctgacctaa
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