Bubalus bubalis (water buffalo): 102408322
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Entry
102408322 CDS
T05912
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102408322 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbub04147
]
102408322 (COPA)
Membrane trafficking [BR:
bbub04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102408322 (COPA)
Exosome [BR:
bbub04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102408322 (COPA)
Exosomal proteins of bladder cancer cells
102408322 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
102408322
NCBI-ProteinID:
XP_044800069
LinkDB
All DBs
Position
6:9467803..9511727
Genome browser
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPMPLTAIVICNRKLEALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDIPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAAAFARRLLEL
GPKPEVAQQTRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKGQICKVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaatttgagaccaagagtgcgcgggttaaaggactcagctttcaccccaaa
agaccctggatcctgaccagtttacacaatggagtcatccagttatgggactatcggatg
tgtaccctcattgacaagtttgatgagcatgatggtccagtacgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacattgcttgggcacttagactacatccgcactacattt
tttcatcatgaatatccttggattctgagtgcctcagatgatcagaccatccgagtgtgg
aattggcagtccagaacctgtgtctgtgtgttaacagggcacaatcattacgtcatgtgc
gctcagttccacccttcagaagacctggtcgtgtcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacctgtcccctggtgcagtggagtcggat
gtgagaggaataacgggggttgatctctttggaactacggatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagttaactgggctgcatttcaccctactatgccactcatt
gtatctggggcagatgaccgtcaagtgaagatctggcgtatgaatgaatcaaaggcatgg
gaagttgatacctgccgaggccattacaacaatgtatcttgtgctgtcttccaccctcgt
caagagttgatcctcagcaattctgaggacaagagtatccgagtctgggacatgtctaag
cgcactggagttcagacattccgcagggaccatgatcgtttctgggtcttagctgcccac
cctaaccttaacctctttgcagcaggccatgatggtggcatgattgtatttaaactggaa
cgagaacggccagcctatgctgttcatggcaatatgctccattatgtcaaggaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccagtgttcagtatgtcgtacaatccagcagaaaacgcagtcctactgtgt
acaagagccagcaatttagaaaatagtacctatgacttgtataccatccccaaggatgcc
gactcccagaatcccgatgctcctgaagggaaacgatcctcaggcctgacagctgtttgg
gttgctcgaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatcta
aagaatgagatcaccaaaaaggtacaggtgcctaactgcgatgagattttttatgctggc
acaggcaacctcctgcttcgagatgcagaatccatcacgctctttgatgtacagcagaag
cggactctggcatctgtgaagatttccaaggtgaaatatgttatctggtcggcagacatg
tcccatgtagcactactggccaaacatgagcactcatgtcctatgcctcttacagccatt
gtgatctgtaaccgcaaactggaggctctgtgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggggactatgggatcatccgaactctggatttacctatctacgtcact
cgggtgaagggcaacaatgtatattgcctggacagggagtgtcgtcctcgggtgctcacc
attgatcccactgagttcaagttcaaactggccctgatcaacagaaaatatgacgaggtg
ctacacatggtgaggaatgcaaaacttgtaggccagtctatcattgcttatcttcagaag
aagggatatcctgaagtggcactgcatttcgtcaaggatgaaaaaactcgctttagtctg
gcactggagtgtggaaacattgagattgctctggaagcagccaaagcactggatgacaag
aactgctgggaaaagctgggagaggtggccttactacaggggaaccaccagattgtggaa
atgtgttatcagcgcaccaaaaactttgacaaactttccttcttgtaccttatcactggc
aacctagagaaacttcgcaagatgatgaagattgctgagatacgaaaggacatgagtggc
cattatcagaatgccctttacctgggagatgtgtccgagcgggtgcggatcctgaagaac
tgtgggcagaagtcactggcctatctcacagctgctacccacggcttagacgaagaagct
gagagcctgaaggagacatttgacccagagaaggagacaatcccagacattgaccctaat
gccaagttgcttcagccacctgcacctatcatgccattggataccaactggcctttattg
actgtgtccaaagggttctttgagggctccattgccagcaaagggaagggaggtgcgctg
gctgctgacattgacattgacactgttggtactgagggctggggagaggatgccgagctg
cagctggatgaagatgggtttgtggaggctacagaaggtttgggggatgatgctcttggc
aagggacaagaagaaggaggtggctgggacgtggaagaagatctggagcttcctcctgag
ctggatataccccccggggcagctggtggagctgaggatgggttctttgtgcccccaacc
aagggaaccagcccaactcagatctggtgtaataactctcagcttccagttgatcacatc
ctggccggctcttttgaaacagccatgcgactccttcacgaccaagtaggggtaacccag
tttggcccctacaagcaactgttcctgcagacctatgcccgaggccgcaccacctatcag
gctctgccctgcctgccctccatgtatggctatcctaatcgcaattggaaggatgcaggg
ctgaagaacggtgtaccagctgtgggcctgaagcttaatgacctcatccagcggttgcag
ctgtgctaccagctcaccacagttggcaagtttgaggaggctgtggaaaaattccggtcc
attttactcagcgtgccacttcttgttgtagacaataaacaagagattgcagaggctcag
cagcttatcaccatttgccgtgagtacattgtgggtttgtccatggagatagaaaggaag
aaactgcccaaagaaactctagaacagcagaagcgcatctgtgagatggcagcctatttc
acccactcaaacctgcagccagtgcacatgatcctggtgttgcgtacagccctcaacctc
ttcttcaagctcaagaacttcaagactgctgccgcctttgctcggcgcctgttggaactc
gggcccaagccggaggtggctcaacagacccgcaaaatcctgtctgcctgtgagaaaaac
cccacagatgcctatcagctcaattatgacatgcacaaccctttcgacatctgtgctgca
tcttatcggcccatctaccgtggaaagccagtggagaagtgtccgctcagtggggcctgc
tattcccctgagtttaagggtcagatctgcaaggtcactacggtgacagagattggcaaa
gacgtgatcggtttgaggatcagccctctgcagtttcgctga
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integrated database retrieval system
