Bubalus bubalis (water buffalo): 102408375
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Entry
102408375 CDS
T05912
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102408375 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102408375 (CPSF2)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102408375 (CPSF2)
U7-dependent histone pre-mRNA processing factors
102408375 (CPSF2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
102408375
NCBI-ProteinID:
XP_025127514
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Position
20:complement(13457300..13489325)
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AA seq
782 aa
AA seq
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MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKVTEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctttctggggtccaagaagaatctgctctttgc
tatcttctccaagtcgacgagtttagatttttattggactgtggctgggatgagcacttt
tctatggatattatcgattccctgaggaagcatgttcaccagatcgatgcggtcttgttg
tctcatcccgaccctctccatcttggcgccctcccctatgctgttggaaagttgggcctg
aactgtgccatctatgcaaccattcccgtttataaaatgggacagatgttcatgtatgac
ctttatcagtcccgacacaatacagaagattttacactctttaccctagatgatgtggat
gcagcctttgataagatacaacagttaaaattctctcagattgtgaatttgaaaggcaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctccttacttatcaca
gactcatttaatgctacttatgtgcagcccaggagaaaacaaagagacgagcagcttctg
acaaatgtcctggaaacacttcgaggtgatggaaacgtattaatagctgtggacactgca
ggcagagttctggaacttgctcaactccttgatcagatttggagaactaaagacgctgga
ttgggtgtttattcgttggcgctcctcaataatgtcagctataatgtggtggagttctct
aagtcccaggtagaatggatgagtgataagttgatgaggtgttttgaagacaaaagaaat
aatccatttcagtttcgtcatctctctctatgtcatggtctttctgacttggctcgagta
cctagccctaaagttgtacttgccagccaacctgacctggaatgtggattttcaagggat
ctctttattcagtggtgccaggaccctaaaaactcgatcattctgacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaagttacagaaatagag
ttgaggaaacgtgtgaaacttgaagggaaagaacttgaagaatacttggaaaaagagaaa
ctaaagaaggaagctgctaaaaagctcgagcagtcaaaagaggcagacatagattccagt
gatgagagtgacgctgaggaagacattgaccagccatcagcgcataagaccaagcatgac
ctgatgatgaaaggcgaaggcagtcgtaaaggaagtttcttcaaacaggctaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagctactgaagaagaaaaaagcaaatta
gagtctggcctgacaaatggagatgaacccatggatcaggatttatctgatgttcctact
aagtgtatttctacaacagaatctattgaaataaaagccagggttacttacatagactat
gaaggacgctctgatggggattccattaaaaaaatcatcaaccagatgaaaccacgccag
ttaatcattgtccatggaccaccagaagccagtcaggatcttgcagagtgctgtcgtgca
tttggtgggaaagatattaaagtatacatgccaaagctgcatgagacagtcgatgccact
agtgaaactcacatctaccaggtgagattaaaagattcacttgtcagctcccttcagttt
tgtaaggcaaaagatgccgaactagcttggatagacggtgtcttagacatgagagtttcc
aaagtggacacaggagttattttagaagaaggcgaactaaaggatgatggagaagactcc
gaaatgcaggtggatgcgccttcagattctagtgtcatagcacagcagaaggccatgaaa
agtctgttcggagacgatgagaaagaaacaggtgaagaaagtgagatcattcctactctg
gaacccttaccacctcatgaggttcctggacatcagtcggtttttatgaatgaaccaaga
ctgtcagacttcaaacaagttcttttaagggaggggatccaagctgaattcgtaggaggt
gtgctcgtttgcaacaatcaagtggcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagacttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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