KEGG   Bubalus bubalis (water buffalo): 102408415
Entry
102408415         CDS       T05912                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X4
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
bbub  Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bbub01009]
    102408415 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bbub03036]
    102408415 (KDM5B)
Enzymes [BR:bbub01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102408415 (KDM5B)
Protein phosphatases and associated proteins [BR:bbub01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102408415 (KDM5B)
Chromosome and associated proteins [BR:bbub03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102408415 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_2 zf-PHD-like PHDvar_NSD
Other DBs
NCBI-GeneID: 102408415
NCBI-ProteinID: XP_025141064
LinkDB
Position
5:complement(994480..1066847)
AA seq 1425 aa
MEAPGPRPVPALGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVR
PPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKIPHVER
KILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYNLF
LSGDSLRVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLMPPLHDVPKGDWRCPKCVAQ
ECSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEE
DVTVEYGADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADI
CGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLETVMKKLAP
ELFISQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEA
VNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMI
EDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSALSCCCKPGLLVCLHHV
QELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSF
KALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSHNQLTV
NELRQFVTQLHALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFE
FDVELPQLAEMRVRLEQAHWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMA
RLQELLTVSEHWDDRAKSLLKARPRHSLNSLTAVVKEIEEIPAHLPNGAALKDSVQRARD
WLQEVEALQAGGRVPVLDALVELVTRGRCIPVHLPSLPRLESLVAEVHVWKECAANTFLT
KNSSYSLLEVLCPRCDIGLLGLKRKQRKLKDPLPSGKKKSPRVESLSDLERTLMESRETA
SAMAALGEARAREMEALQSLRQANEEKLLSPVHDVEMRVCVCQKAPAAPMVQCELCRDAF
HTSCVASPSIPQSPRVWLCPNCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERT
VSWQHRARQLLSSGHLKSLQDPVGSGLLCGRWQATAGQVPETSKISQPPGPTSFSLPDDW
DNRTSYLHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSLPEIQELYQTLLAKPSPAQQ
ADHSSPVRPGSEKSDGCRGKRDGASSLESKLKRRLEREGLSSERWDRITKMRAPKKKRIK
LSHPKDTDSLKLERECSYELAPSADTQSLPSDSSSSEQEDSEDEDAICPAVSCLQPEGDE
VDWVQCDGSCSRWFHQVCVGVSPETAEEEDYVCVRCAETDVPGRR
NT seq 4278 nt   +upstreamnt  +downstreamnt
atggaggcccccggcccgcgccccgtgccggccctcggcggtcccggcccattgggggag
ttcctgccgccgcccgagtgcccggtcttcgagcccagctgggaggagttcgccgatccc
ttcgccttcatccacaagatacggcccatagccgagcagaccgggatctgcaaggtgcgg
ccgccgccggattggcagccaccatttgcctgtgatgttgacaaacttcattttaccccg
cgtatccagaggctcaatgagctggaggctcaaacacgtgtaaaattaaatttcctggac
cagattgcaaagtactgggaattacagggaagtactctgaaaattccacacgtggagagg
aagatcttggacttgtttcagcttaataagttagttgcagaggaaggtggatttgcagtt
gtttgcaaggatagaaaatggaccaaaattgccaccaagatgggctttgctcctggcaaa
gctgtgggctctcatatcagaggacactacgagcggattctgaacccctacaacttattt
ctgtctggagacagcttgagggttgacctgtacgtctgcctcttgtgcggcagcggcagc
gacgaggaccggctcctcctgtgcgacgggtgtgacgacagctaccacaccttctgcctg
atgccgccgctgcacgacgtccccaagggcgactggaggtgccccaagtgcgtggctcag
gaatgcagtaagccacaagaagcattcggctttgagcaggcggccagggactatactctc
cgtactttcggtgaaatggcagatgcattcaaatcggattacttcaacatgccagtccat
atggttcccacggaactggtagagaaggaattttggcgactagtgagcactattgaagag
gatgtcaccgtggaatatggagccgatattgcctcgaaggagtttggcagtggcttccct
gtccgagatgggaaagtcaagctctcacctgaggaggaggagtatcttgatagtggctgg
aatctaaacaacatgccagtgatggagcagtctgttctcgctcacatcactgccgacata
tgcggcatgaagcttccttggctgtacgtgggaatgtgcttttcttccttctgttggcac
attgaagaccactggagctattcgattaactacctgcactggggtgagccaaagacctgg
tacggcgttcccgggtacgccgctgagcagctggagaccgtgatgaagaagctggcccca
gagctcttcatctcccagcccgaccttctccaccagcttgtcaccatcatgaaccccaac
accctgatgactcacgaagtgcctgtttaccgaactaatcagtgtgctggggagtttgtg
atcacctttccaagagcctaccacagcggtttcaatcaaggtttcaattttgctgaggcc
gttaacttctgcactgttgattggctgcccttgggccgacagtgtgtggagcattaccgt
ctgctccaccgctactgcgtgttctcccatgacgagatgatctgcaagatggcttccaag
gcggatgtcctagacgttgtagtggcctcaactgttcagaaggacatggccatcatgatt
gaggacgagaaggcgctcagggaaactgttcgcaaattgggagtaattgattcggaaaga
atggattttgaactgttgccggatgatgagcgtcagtgtgtgaaatgcaaaaccacgtgc
ttcatgtctgccctctcctgctgctgcaaacctggcctgcttgtttgcctgcatcacgta
caggagttatgttcctgtcctccttataaatacaaactgaggtacagatacactctggat
gacctctaccccatgatgaatgcattgaagcttcgagcagagtcttataacgagtgggcc
ttgaatgtgaatgaagctttggaggctaagattaataagaagaaaagccttgtcagcttt
aaggctttgattgaagaatctgagatgaagaaatttccagacaatgatcttctacgtcac
ctccgcttagtcacacaggacgcagagaaatgcgcctctgttgcccagcagttgcttaat
ggcaagaggcagacgagataccggtctggtggagggaaatcccacaatcagctgaccgtg
aatgagctccggcagtttgtgacccagctgcacgccctcccctgtgtcctcagtcagaca
ccgctgctgaaggatctcttgaatcgtgtagaagatttccaacagcatagccagaaactg
ctctctgaggagatgcccagcgctgccgagctgcaggacttgctggatgtcagctttgaa
tttgatgttgagctcccccagcttgctgagatgcgtgtccggctggagcaggcccattgg
ctggaggaggtgcagcaggcttgcctggacccgagctccctcaccttagatgatatgaga
cgtctcatagacctgggggtgggcctggccccgtattcagccgtggagaaggctatggcg
cggcttcaggaactgctcacagtatcagagcactgggatgacagagccaagagtctcctc
aaggccaggcctcggcattcactgaacagcctgaccgccgtggtgaaggagattgaggag
atccccgcacacctgcccaacggcgcggcgctgaaagactctgtgcagagagccagagac
tggcttcaagaagtggaggccctgcaggctggaggacgtgtgccagtgttggacgcgctg
gtggagcttgtcactcggggccggtgtatcccggtgcatctaccctcactgccgaggctg
gagtccttagtagctgaagttcatgtttggaaagaatgtgctgctaatacattcctgact
aagaactcgtcctattctctcctagaggtgctgtgtcctcggtgtgatattggccttttg
ggattaaagaggaagcagagaaagttaaaggatcccttgccaagtggcaagaagaagagt
ccccgtgtagagagtctgagcgacctggagagaacgctgatggaaagcagagagactgct
tcagctatggcagcactcggggaagctcgcgcacgagaaatggaagccttgcagtctctc
cgacaagccaatgaggagaaactgctgtcgcctgtgcacgatgtggagatgagagtctgc
gtgtgtcagaaggcccccgcggcccccatggtccagtgtgaactctgcagggatgctttc
cacaccagctgtgtggcatctcccagcattccacagagcccccgagtctggctgtgtccc
aactgtcggaggtcagagaagcctccgctcgagaagattctgcccctgctggcctccctg
cagcgcatccgcgtccgcctgcccgagggagacgcactgcggtatatgatcgagaggacc
gtgagctggcagcacagagcccggcagctgctctcgtcggggcacctcaagtccttgcag
gacccagtgggctcaggactgttgtgtggcaggtggcaggccacagcaggacaggtgcca
gagaccagcaagatatctcagcctcctggccccacgtccttctccttgcccgacgactgg
gacaacagaacctcctatttacactctcctttctccactggtcggagctgtatccccctc
catggtatcagcccagaagtgaatgagctgctgatggaggcccagctgctccaggtgtcc
cttcctgaaattcaggagctctaccagacattactcgcaaagccgagccctgcgcagcag
gctgaccacagctctccagtgagacccggcagtgagaagagtgacggctgccgagggaag
cgagacggagccagcagcctcgagagcaagctgaagagacgcctggaaagagaaggcctc
tccagtgagcggtgggatcgaatcaccaaaatgcgggcccccaaaaagaagagaatcaaa
ctgagccaccccaaggacacggacagtctcaagttagagagagagtgtagctatgagttg
gccccctctgccgacacgcagtccctgccctcagactcgtcctcctcggagcaggaggac
tctgaggacgaggacgccatctgcccggccgtgagctgcctgcagccagaaggagacgag
gtggactgggtccagtgtgatggcagctgcagtcggtggttccatcaggtctgtgttggt
gtctctcccgagacggccgaggaggaggactacgtgtgcgtgcgctgcgcggagacggac
gtgccgggccggagatag

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