KEGG   Bubalus bubalis (water buffalo): 102408417
Entry
102408417         CDS       T05912                                 
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
  KO
K08533  RAR-related orphan receptor beta
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    102408417 (RORB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bbub03000]
    102408417 (RORB)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:bbub03310]
    102408417 (RORB)
Transcription factors [BR:bbub03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    102408417 (RORB)
Nuclear receptors [BR:bbub03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   102408417 (RORB)
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 102408417
NCBI-ProteinID: XP_006057280
EnsemblRapid: ENSBBUG00015010555
LinkDB
Position
3:112673916..112877794
AA seq 459 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYGSSISNGLSSLNNEASGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctctgggatc
cactacggagtcatcacgtgtgaaggctgcaagggattctttaggaggagccagcagaac
aatgcctcttactcctgcccgaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcaagagatgctgtg
aagtttgggaggatgtccaagaagcaaagagacagcctgtatgctgaggtgcagaagcac
cagcagcggctgcaggagcagcggcagcagcagagtggggaggcggaagccctcgccagg
gtgtatggcagcagcatcagcaatggcctcagcagcctgaacaatgaggccagtggcaca
tatgctaatggacacgtcattgacctgcccaagtccgagggttattacaacgtggattcc
ggccagccgtcccccgatcagtcaggacttgacatgactggaatcaagcagataaagcaa
gaacctatctatgacctcacatccgtacccaacctgtttacctatagctctttcaacaac
gggcagttagcaccagggataacaatgagcgaaatcgatcgaattgcacagaacatcatt
aagtcccatttggagacatgtcagtacaccatggaggagctgcaccagctggcatggcag
acccacacctacgaagagatcaaagcgtatcaaagcaagtccagggaagcactgtggcag
caatgtgccatccagataacccacgccatccagtatgtggtagagtttgcaaagcgaata
acaggcttcatggaactctgtcaaaatgatcaaatcctacttcttaagtcaggttgcttg
gaagtggttttagtgagaatgtgtcgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcagatgttcaaggccttaggttctgatgacttagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaggaagagattgct
ttgttctcctctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcgaagctaatagccaagataccaaccatcacagcagtttgc
aacttgcacggggagaagctgcaggtatttaagcaatcgcatccagacatagtgaataca
ctctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtctgcaaatga

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