Bubalus bubalis (water buffalo): 102408417
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Entry
102408417 CDS
T05912
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
102408417 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102408417 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bbub03310
]
102408417 (RORB)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102408417 (RORB)
Nuclear receptors [BR:
bbub03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
102408417 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102408417
NCBI-ProteinID:
XP_006057280
EnsemblRapid:
ENSBBUG00015010555
LinkDB
All DBs
Position
3:112673916..112877794
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AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYGSSISNGLSSLNNEASGTYANGHVIDLPKSEGYYNVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMSEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctctgggatc
cactacggagtcatcacgtgtgaaggctgcaagggattctttaggaggagccagcagaac
aatgcctcttactcctgcccgaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcaagagatgctgtg
aagtttgggaggatgtccaagaagcaaagagacagcctgtatgctgaggtgcagaagcac
cagcagcggctgcaggagcagcggcagcagcagagtggggaggcggaagccctcgccagg
gtgtatggcagcagcatcagcaatggcctcagcagcctgaacaatgaggccagtggcaca
tatgctaatggacacgtcattgacctgcccaagtccgagggttattacaacgtggattcc
ggccagccgtcccccgatcagtcaggacttgacatgactggaatcaagcagataaagcaa
gaacctatctatgacctcacatccgtacccaacctgtttacctatagctctttcaacaac
gggcagttagcaccagggataacaatgagcgaaatcgatcgaattgcacagaacatcatt
aagtcccatttggagacatgtcagtacaccatggaggagctgcaccagctggcatggcag
acccacacctacgaagagatcaaagcgtatcaaagcaagtccagggaagcactgtggcag
caatgtgccatccagataacccacgccatccagtatgtggtagagtttgcaaagcgaata
acaggcttcatggaactctgtcaaaatgatcaaatcctacttcttaagtcaggttgcttg
gaagtggttttagtgagaatgtgtcgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcagatgttcaaggccttaggttctgatgacttagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaggaagagattgct
ttgttctcctctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcgaagctaatagccaagataccaaccatcacagcagtttgc
aacttgcacggggagaagctgcaggtatttaagcaatcgcatccagacatagtgaataca
ctctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtctgcaaatga
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