Bubalus bubalis (water buffalo): 102408468
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Entry
102408468 CDS
T05912
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X2
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102408468 (HIF3A)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102408468 (HIF3A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_4
PAS_9
HLH
PAS_2
SpoVAD
Motif
Other DBs
NCBI-GeneID:
102408468
NCBI-ProteinID:
XP_006067535
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All DBs
Position
18:53039810..53072032
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AA seq
669 aa
AA seq
DB search
MALGLQRARSSTELRKEKSRDAARSRRSQETEVLYQLAHTLPFARGVSAHLDKASIMRLT
ISYLRMHRLCTAGEWNQVGAGGEPLDACYLKALEGFVMVLTAEGDMAYLSENVSKHLGLS
QLELIGHNIFDFIHPCDQEELQDALTPRQSLSKKKPEAPTERCFSLRMKSTLSSRGRTLN
LKAATWKVLHCSGHMRVYKPPAQTSPAGSPNLEPPLQCLVLICEAIPHPGSLEPPLGRGA
FLSRHSLDMKFTYCDERIAEVAGYSPDDLIGCSAYEYIHALDSDAVGQSIHTLLSKGQAV
TGQYRFLARSGGYLWTQTQATVVSGGRGPQSESIVCVHFLISRVEETEVVLSLEQTEQHS
RRHVQRGSPSQKDAPNPGDRLDTSGPRILAFLHPPALSEAALAADPRRFCSPDLRRLLAP
ILDGTSVAATPSAPPATRRPQSPLPADLPDDLFVDVENAHKVLASGKDLQTVETDLDIAQ
DVDALDLEMLAPYISMDDDFQLNSSEQLPRAYHRPPGAVPRPRARSFHGMSPPTPETSLL
PRWGSDPRLSCSSPSRGDPSASSPMVGARKRALVPSSEDEAEKVELLGIRPPKRSPSLEP
ENFLLPPLSLSFLLTGGPAPGSRQDPSTHLLELNEPLGPGPSLLSLYPDEDTAQPRSHFQ
LAAGLAQAN
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgggactacagcgcgcaaggtcgagcacggagctgcgcaaggagaagtcccgg
gatgcggcccgcagccggcgcagccaggagaccgaggtgctgtaccagctggcgcacacg
ctgcccttcgcgcgcggggtcagcgcccacctggacaaggcctccatcatgcgcctcacc
atcagctacctgcgcatgcaccgcctctgcacagcaggggagtggaaccaggtgggagca
gggggcgaaccgctggatgcctgctacctgaaggccctggagggctttgttatggtgctc
accgccgagggagacatggcttacctgtcagaaaatgtcagcaaacacctgggcctcagt
cagctggagctgatcggacacaatatctttgattttattcatccctgtgaccaagaggag
cttcaagatgccctgaccccccggcagagcctgtccaaaaagaagccggaggcccccacg
gaacggtgcttctccttgcgcatgaagagcaccctcagcagccgtgggcgcaccctcaat
ctcaaggcggccacctggaaggtactacactgttctggacacatgagggtctacaagccc
ccggcacagacttccccggctgggagtcccaacttggagccccctctgcaatgcctggtg
ctaatctgtgaagccatcccccaccctggcagcctggagcccccgttgggccgaggggcc
ttcctcagccgccacagcctggacatgaagttcacctactgtgatgagaggatcgcggag
gttgccggctacagccccgacgacctgattggctgttctgcctatgagtacatccacgcg
ctggactcggatgcagtcggccagagcatccatacgttgctgagcaagggccaggcagta
acggggcagtaccgcttcctggcccggagtggtggctacctgtggacccagacccaggcc
acagtggtgtcagggggccggggtccccaatctgagagtatcgtctgcgtccacttcctg
atcagccgagtggaagagaccgaagtggtgctgtccctggagcaaacagagcaacactct
cgcagacatgttcagcggggcagcccctctcagaaggatgctcctaatcctggggacaga
cttgacacctctggtccccggatcctggctttcctgcacccccctgccctgagtgaggcc
gccctggccgctgacccccgtcggttctgtagccctgacctccgtcgcctcctggcacca
atcctggacgggacttcagtagctgctacccccagtgcacccccagccacgcggcgcccc
cagagtcctcttccggctgatctcccagatgatctctttgtggacgtggagaatgcacac
aaagtcctggcctctgggaaagacctgcagacagtggagacagacctagatatcgctcag
gacgtcgatgctctggatttggagatgctggccccctacatctccatggatgatgacttt
cagctcaactccagcgagcagctacccagggcctaccacagacctccaggggctgtcccc
cggccccgtgctcggagcttccacggcatgtcacccccaacccctgagacctccctgctg
ccccgctgggggagtgacccccggctgagttgctccagcccttccagaggggatccctca
gcatcctcccccatggttggggctcggaagagggccctggtcccgagctcagaagacgag
gcagagaaggtggagctcctgggcatcaggccccccaaacgatcccccagcctagaaccc
gaaaacttcctgttgcctcccctcagcctgagcttccttctgacaggaggaccagcccca
gggagccggcaggatcccagcacccacctcctggaactgaatgagcccctgggcccgggc
ccctccctgctctctctctacccggacgaggacacggcccagcccaggagccactttcag
ctagcggcaggcttggcccaggccaactga
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