Bubalus bubalis (water buffalo): 102408482
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Entry
102408482 CDS
T05912
Symbol
SOX11
Name
(RefSeq) transcription factor SOX-11
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102408482 (SOX11)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102408482 (SOX11)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102408482
NCBI-ProteinID:
XP_025117398
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Position
12:complement(90353529..90362307)
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AA seq
455 aa
AA seq
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MVQQAESLEAESNLPREALDTEEGEFMACSPVALDESDPDWCKTASGHIKRPMNAFMVWS
KIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRP
RKKPKMDPSAKPSAGQSPEKSAAGGGGGSAGAGAGGGAKTSKGSSKKCGKLKAPAAPAAG
GAKAGAGKAAQPGDGGGAGDDYVLGSLRVSGAGKTVKCVFLDDDEDEEDDEDELQLRIKQ
EADEDDDEPPPHAQLLQPPGQQPPPPPLLRRYSVAKVPASPTLSSAAESPEGASLYDEVR
AGAASGAGGGSRLYYSFKNITKQHPPPLAQPALSPASARSVSTSSSSSSSSGGGGGGGSS
SSSSSSSGGEDADDLMFDLSLNFSQSAHGAGDQQLGGGAAAGNLSLSLVDKDLDSFSEGS
LGSHFEFPDYCTPELSEMIAGDWLEANFSDLVFTY
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaggccgagagcttggaagcggagagcaacctgccccgggaggcgctggac
acggaggagggcgaattcatggcttgcagcccggtggccctggacgagagcgacccggac
tggtgcaagacggcgtcgggccacatcaagcggccgatgaacgcgttcatggtgtggtcc
aagatcgagcgcagaaagatcatggagcagtcgccggacatgcacaacgccgagatctcc
aagaggctgggcaagcgctggaaaatgctgaaggacagcgagaagatcccgttcatccgg
gaagcggagcggctgcggctcaagcacatggccgactaccccgactacaagtaccggccc
cggaaaaagcccaagatggacccgtcggccaagcccagcgcgggccagagcccggagaag
agcgcggcgggcggcggcggcgggagcgcgggcgcgggcgcgggcggcggcgccaagacc
tccaagggctcgagcaagaaatgcggcaagctcaaggcccccgcggccccggcggccggc
ggcgccaaggcgggcgcgggcaaggcggcgcagcccggggacggcggcggcgcgggcgac
gactacgtgctgggcagcctgcgcgtgagcggcgcgggtaagacggtcaagtgtgtattc
ctggacgacgacgaggacgaagaggacgacgaggacgagctgcagctgcggatcaagcag
gaggcggacgaggacgacgacgagccgccgccgcacgcgcagctcctgcagccgccgggc
cagcagccgccgcccccgccgctgctgagacgctacagcgtcgcgaaagtgcccgccagc
cccacgctgagcagcgcggccgagtcccccgagggcgcgagcctgtacgatgaggtgcgg
gccggcgcggcctcgggcgcggggggcggcagccgcctctactacagcttcaagaacatc
accaagcagcacccgccgccgctggcgcagcccgcgctgtcgcccgcgtccgcgcgctcc
gtgtccacctcctcttcgtcctcctcgtccagcggcggcggcggtggcggcggcagcagc
agcagcagcagcagcagcagcggcggcgaggacgccgacgacctgatgttcgacctgagc
ttgaatttctcccaaagcgcgcacggtgccggcgaccaacagctggggggcggcgcggcg
gccgggaacctgtccctgtcgctggtggataaggatttggattcgttcagcgagggcagc
ctgggctcccacttcgagttccccgactactgcacgcccgagctgagcgagatgatcgcg
ggggactggctggaggcgaacttctccgacctggtgttcacgtattga
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