Bubalus bubalis (water buffalo): 102408603
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Entry
102408603 CDS
T05912
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X8
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102408603 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbub04121
]
102408603 (HERC4)
Enzymes [BR:
bbub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102408603 (HERC4)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
HECT type E3
102408603 (HERC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102408603
NCBI-ProteinID:
XP_025140395
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Position
4:complement(143603866..143730360)
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AA seq
912 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
SEECIRVPRNIKSLSDVQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQAS
PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDFDSEE
YFCVKRIFSGGDQSFSHYSNPQNCGPPDDFRYPDPSKQIWTVNEALIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVSLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNEKSGQIIQYDKFYIHEVQELIDIRNDYIIWVQQQAYGMTFEDSDLFHLIGVICGLA
IYNFTIVDLHFPLALYKKLLKKKPSLEDLKELVPDVGRSMQQLLDYPEDDVEETFCLNFT
ITVENFGATEVKELVLNGADTAVNKQNRQEFVDAYVDYIFNKSVASLFDAFHAGFHKVCG
GKVLQLFQPNELQAMVIGNTNYDWKELEKNTEYKGEYWAEHPTIKMFWEVFHELPLEKKK
QFLLFLTGSDRIPILGMKSLILVIQSTGGGEEYLPVSHTCFNLLDLPKYTDKETLRSKLI
QAIDHNEGFSLI
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcttcttttggacagctaggtttgggtggaattgatgaagaa
attgtactagagcccagaaaaagtgacttttttataaataaaaaggttcgagatgtagga
tgtggactcagacatactgtatttgttctggatgatggaacagtgtacacgtgtggatgt
aatgatctagggcagctaggtcatgaaaaatccagaaagaaaccagagcaggttgttgcc
ctggatgcccaaaatattgtagctgtttcatgtggagaagctcatacattagcactaaat
gacaagggccaggtgtatgcttggggtctcgattctgatggacaacttggcctgctagga
tcagaggaatgtatcagagtacccagaaatattaaaagtttgtcggatgtccagatagta
caggttgcttgtggttactatcattcacttgcactttctaaagcaagtgaagtcttctgt
tggggacagaataaatatggccaattgggtttaggcattgactgtaaaaagcaagcttca
ccacagctgattaagtctttacttggaatccctttcatgcaaattgcggccggaggagcc
catagttttgtactcaccctttctggagctatctttggatggggacgcaacaaatttggt
caactaggtcttaatgatgaaaatgataggtatgttcctaatttactaaagtcactaaga
actcagaaaatagtttatatttgttgtggagaagatcatactgctgcactaaccaaggaa
ggcggagtgtttacttttggagctggagggtatggtcagttgggtcataactctaccagt
catgaaataaacccaagaaaagtttttgaacttatgggaagcattgtcactcagattgct
tgtggaaggcagcacacttctgcttttgttccttcatcaggacgaatttattcttttgga
cttggtggtaatggacagctaggaactggttcaacaagcaacaggaaaagtcctttcact
gtgaaaggaaattggtttccttataatgggcagtgtccaccagattttgattctgaagaa
tatttctgcgtgaaaagaattttctcaggtggagatcaaagcttttcacattattctaat
ccccagaactgtgggccaccagatgactttagatatcctgatccttcgaagcagatctgg
actgtgaatgaagctctaattcaaaaatggctcagctacccctctggaagatttcctgta
gagatagccaatgaaattgatggaacattttcttcatctggttgtctaaatggaagtttt
ttagctgttagcaatgatgatcactatagaacgggcactagattttcaggggttgacatg
aatgctgctagacttttattccacaaacttatacaacctgatcatcctcagatatctcag
caggtggcagctagcttggaaaagaatcttattcctaaactgactagctccttacctgat
gttgaagcattgagattttatcttactctaccagaatgtcccctgatgagcgattccaac
aatttcaccacaatagcaattccctttggtacagctcttgtgagcttagaaaaggcaccg
ctgaaagtacttgaaaactggtggtcagtacttgaacctccgctattcctcaagattgta
gaactttttaaggaggttgtggtacatcttttgaaactctacaagatcggcattccccct
tctgagagaagaattttcaacagttttcttcatactgcattaaaggttttagaaatatta
catagggtaaatgagaaatctggacagattattcaatatgataaattttatatacatgaa
gtacaagaattgatagacatacggaatgattatatcatctgggtccaacagcaggcctat
ggaatgacatttgaagacagtgatttattccacttaattggtgttatctgtggattagca
atttataattttactattgtggacctccattttcctttggctttatataagaaactgcta
aaaaagaagccatccctggaagatttgaaagaactggtccctgatgttgggagaagcatg
caacagttactggactatcctgaagatgatgttgaagagacattttgtcttaattttacg
atcacagttgaaaactttggtgcaacagaagtgaaagaactggttctaaatggtgcagac
acagctgttaacaaacaaaatcgacaagagtttgttgatgcttatgtggattacatattc
aataaatcagtggcttccttatttgatgcttttcatgcgggctttcataaggtctgtgga
ggaaaagtccttcagctctttcagcctaatgaactacaagcaatggttattggaaacaca
aattatgattggaaggaattggaaaagaatacagaatacaaaggagaatattgggcagaa
catcctacaataaaaatgttctgggaagtatttcatgaattaccattggaaaagaaaaaa
caatttttgttatttttgacaggtagtgatcgcattcctattcttggtatgaagagtcta
atactagtcatccagtcaacaggaggtggtgaggaatatctcccagtttcccatacctgt
tttaatcttctggatcttccaaaatatacagacaaagaaactctacgctctaaactgatt
caagctattgatcacaatgaaggcttcagtttaatataa
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