Bubalus bubalis (water buffalo): 102408660
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Entry
102408660 CDS
T05912
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04350
TGF-beta signaling pathway
bbub04919
Thyroid hormone signaling pathway
bbub05016
Huntington disease
bbub05169
Epstein-Barr virus infection
bbub05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
102408660 (SIN3A)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
102408660 (SIN3A)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102408660 (SIN3A)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
102408660 (SIN3A)
09164 Neurodegenerative disease
05016 Huntington disease
102408660 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102408660 (SIN3A)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
102408660 (SIN3A)
REST complex
102408660 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102408660 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
102408660
NCBI-ProteinID:
XP_006080739
LinkDB
All DBs
Position
20:complement(36955461..37023317)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRIPGSAEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSSSHGPTIAAVHSSHHHPTAVQPHGGQVVQSHAHPAPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQ
PAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPPLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
SQNGCQIRRHSGTGATPPVKKKPKLLSLKDSSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEENAGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLAENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLARKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKTMENADSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTVFKTP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgtttggatgaccaggagtcaccggtgtatgcggcccagcagcgtcggatt
cctggtagcgcagaggcttttcctcaccagcaccgggtgcttgcccctgcccctcccgtg
tatgaagcggtgtctgagaccatgcagtcagccacagggattcagtactctgtgacaccc
agttatcaggtttcagcagtgccgcagagctccagcagtcatgggcccaccatcgcagcg
gttcatagcagccatcatcaccccacagctgtgcagccccacggaggccaggtggtccag
agccacgctcatccagctccaccagttgcacccgtgcagggacagcagcagtttcagaga
ctcaaggtggaggatgccctgtcctaccttgaccaagtgaagctgcagtttggtagtcag
cctcaggtctacaatgacttccttgacatcatgaaggagtttaaatctcagagcatcgac
actccaggagtgattagtcgcgtgtcccagctgttcaaaggccaccctgacctgatcatg
ggcttcaataccttcttgccccctggctacaagattgaggtgcaaaccaatgacatggtg
aatgtgacaactcctggccaggttcatcagatcccaacccatggcattcagccccagcct
cagccaccaccccagcatccttcccagccttcagcccagtcagccccagcacctgcccag
ccagctcctcagcccccacctgccaaagtcagcaagccttcccaactacaagcacatact
ccagccagtcagcagactcccccactcccaccatacgcgtccccacgttctccacctgtc
cagcctcatacaccagtgacaatctcgttgggaacagccccgcccttgcagaacaatcag
cctgtggagtttaaccatgccatcaactatgttaataagatcaagaacaggttccagggc
caaccagacatctacaaagcgttcctggagattttgcacacatatcagaaagagcagcga
aatgccaaggaagctggaggaaactacactccagccttgactgagcaggaggtgtatgcc
caggtggctcgtctttttaaaaatcaggaagatctgttatcagaatttggacagttccta
ccagatgccaacagctctgtgcttttaagcaaaacaactgctgagaaggtcgattccgtg
agaaatgaccacggaggcacggtgaagaaacctcagctgaacaacaagccacagaggccc
agccagaatggctgccagattcgcaggcactctggaacaggggccacccctccagtgaag
aagaaacctaaactgctcagcctcaaagattcttctatggcagatgccagcaagcatggt
gtaggaacggaatcattattttttgataaggtccgaaaggctctgcggagtgcagaggcc
tatgaaaatttcctgcgctgtcttgttatctttaaccaggaggtgatctctcgggcggag
cttgtgcagttagtctctccattcctggggaaattcccagaattgtttaattggtttaaa
aactttctgggctataaggagtctgtacatctggaaacctttccaaaagaacgggccaca
gagggcattgccatggagatagattatgcctcttgtaaacggttgggctccagctatcga
gccctaccaaagagttaccagcagcccaagtgtacgggtcggactcctctctgtaaagag
gttttaaatgatacctgggtttccttcccctcctggtctgaggactccacctttgttagt
tccaagaaaactcagtatgaagaacatatctatcgttgtgaagatgaacgttttgagctt
gatgtagttttagagaccaatctggcaactatccgggttctggaagcaatacagaagaaa
ctttcccgcttgtctgctgaagaacaagctaaatttcgcttggacaacaccctcgggggc
acatcggaagtcatccaccgaaaagcactccaaaggatatatgctgacaaagcagctgac
atcattgatggtctgaggaagaacccttccattgccgtcccaattgtccttaaaaggttg
aagatgaaagaggaagaatggcgagaagctcagagaggctttaacaaggtgtggagagag
caaaatgagaaatactacttgaaatctctggaccaccaaggcatcaactttaaacaaaat
gacaccaaggtcctgaggtccaagagcttactcaatgagattgagagtatctatgatgag
aggcaagagcaggctacggaagaaaatgctggtgtacctgttggcccacacctctcactt
gcctatgaagacaaacagattctggaagatgctgctgctctgattatccaccatgtgaag
aggcagacaggcattcagaaggaagacaaatacaaaatcaagcaaatcatgcatcatttt
attccagatctgctctttgctcagagaggtgatctctcagatgtggaggaagaggaagaa
gaagagatggatgtagatgaagccacaggggcggctaagaagcacaatggtgttgggggc
agtccccctaagtccaagctactatttagtaacacagcagctcagaagttaagagggatg
gatgaagtgtacaacctcttctatgttaataataactggtatatctttatgcggctgcac
cagatactctgcttgaggctgctgcggatttgttcccaagctgaacggcaaattgaagaa
gaaaaccgagaaagagagtgggaacgggaagtgctgggcatcaagcgagacaagagtgac
agccctgccatccagctgcgtctcaaagaacctatggatgttgatgtagaagattattac
ccagctttcctggacatggtgcggagcctgctggatggcaacatagactcgtcccagtac
gaagattcactgagagagatgttcaccattcatgcctacattgcctttaccatggacaaa
ctcatccagagcattgtcagacagctgcagcatatcgtgagtgatgagatctgtgtacaa
gtgacggacctgtacctggcagaaaacaataatggggccacaggaggccagctgaacaca
cagacgtcaaggagcctcctggagtcaacatatcagcggaaagctgagcagctcatgtca
gatgaaaattgctttaagcttatgttcattcagagccaaggccaggttcagctgacaatt
gagcttctggacacagaagaggagaactccgatgatcctgtagaagcagagcgctggtca
gactacgtggagcgatacatgaattctgatactacctctcctgagcttcgtgagcatctg
gcacggaaaccagtatttctcccacggaatctgcggcggatccggaagtgtcagcgtggt
cgagagcagcaggaaaaggaagggaaggaaggaaacagcaagaagaccatggagaatgcg
gatagcctggataaactggagtgtagattcaagctgaattcctacaagatggtatatgtg
atcaagtcagaggactacatgtaccggaggaccgccttgctgcgggctcatcagtcccat
gagcgtgtaagcaagcggctacatcagaggttccaggcctgggtagataaatggaccaag
gagcatgtgccccgtgaaatggcagcggagaccagcaagtggcttatgggtgaggggctg
gagggcctggtgccctgcaccaccacctgtgacacagagaccctgcactttgtgagcatt
aacaagtaccgtgtcaaatatggcacagtgttcaaaaccccgtaa
DBGET
integrated database retrieval system
