KEGG   Bubalus bubalis (water buffalo): 102408674
Entry
102408674         CDS       T05912                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1 isoform X3
  KO
K21944  period circadian protein 1
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04710  Circadian rhythm
bbub04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    102408674 (PER1)
   04713 Circadian entrainment
    102408674 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bbub03400]
    102408674 (PER1)
DNA repair and recombination proteins [BR:bbub03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    102408674 (PER1)
SSDB
Motif
Pfam: Per3-like_PAS-A Period_C bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 102408674
NCBI-ProteinID: XP_044795263
LinkDB
Position
3:35310306..35325569
AA seq 1268 aa
MSRSGPLEGAEGGGDPRPGEPFCPGGGPSPGPPEHRPCPGPSLADDTDANSNGSSGNESN
GPESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEPDN
PSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQAN
QEFYQQWSLEEGEPCAMDMSTYTLEELEHVTSEYTLRNQDTFSVAVSFLTGRIVYISEQA
GVLLRCKRDVFRGTRFSELLAPQDVGVFYGSTTPSRLPTWGPGTSTGSGLKDFTQEKSVF
CRIRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKR
IFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQ
PFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPVPSP
ALSLDSDIQELSEQIHRLLLQPVHSPSPTGLCGVGPVPSSGPLLSPGSSSDSNGGDAEGP
GPPAPVTFQQICKDVHLVKHQGQQLFIESRARPLPRPRVPATGTFKAKTLPCPSPDLEAS
PAPIQAPVALAAEEAERKEASSCSYQQINCLDSILRYLESCNLPGTAKRKCASSSSCTAS
SASDDDKQRAGPVSVGTKKDPSAVLPGEGATPLKEPVVGGGALSPLALANKAESVVSITS
QCSFSSTIVHVGDKKPPESDIIMMEDLPSLPPGPAPSPAPSPTVAPDPAPDAYRPVGLTK
AVLSLHTQKEEQAFLSRFRDFSRLHGLDSSSTAPSAPGERGCHHSLAIPGRRHHCRSKAK
RSRHHQTARAEAPGYVSQPSPVPPSAPWPPPPATPPFPAVVQPYPLPVFPPRGGPQPLPP
APTSVPPAAFPAPLVTPMVALVLPNYLFPTPSTYPYGAPQMPAEGPPTPASRSPSPSLPS
LPPSPPHRPDSPLFNSRCSSPLQLNLLQLEEAPRGEGGAAAGGSGSSAGHPPPSEEMAEP
EARLAEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSHEGGSTS
ASITRSSQSSHTSKYFGSIDSSEAEAGAAQAKAEPADQVIKYVLQDPIWLLMANADQRVM
MTYQVPSRPVWTAVAAPKSLAILMTLSSQKWMDWGWSPWRRAEARVVAVVVRVRAAMRPR
PKLGPGSRALRTWPWKRRSKVGAHPVQPYLPQKMAPARLHFGPPPGVHEKLPSLMPQLSE
LRCGWTNQ
NT seq 3807 nt   +upstreamnt  +downstreamnt
atgagcaggagcggccccctagaaggggctgaagggggaggggaccccaggccaggggaa
cccttttgtcctggagggggtccatcccctgggcctccagagcaccgaccttgtcctggc
cccagcttggctgatgacacggatgccaacagcaatggctctagcggcaatgagtccaat
ggacccgagtccaggggtgcatctcagcggagttcgcacagctcctcctccggcaatggc
aaggactcagccctgctggagaccactgagagcagcaagagcacgaattctcagagccca
tccccacccagcagttccattgcctacagcctcctgagtgccagctctgagccagacaac
ccttctaccagtggctgcagcagtgaacagtcagctcgggcaaggactcagaaagaactc
atgacggcactgcgagagctcaagcttcggctgcccccggagcgcaggggcaagggccgc
tccgggactctggccacactgcagtacgcgctggcctgtgtcaagcaggtgcaagccaac
caggagttctaccagcaatggagcctggaggagggcgaaccgtgtgccatggacatgtcc
acctatactctggaggagctggagcacgtcacgtctgagtacacactccgcaaccaggac
accttctccgtggctgtctccttcctgacaggccgcatcgtctacatttccgagcaggcg
ggtgtcctgctgcgctgcaagcgggatgtgttccggggcacccgcttctcagagcttttg
gcaccccaggacgtgggcgtcttctacggttccaccaccccatcccgcctgcccacctgg
ggcccagggacctccacaggttcaggcctcaaggacttcacccaggagaagtctgtcttc
tgtcgtatcagagggggtcctgaccgggatccagggcctcggtaccagccattccgccta
accccatatgtgaccaagatccgggtctctgacggggcccctgcccagccatgctgcctg
ctcattgcagagcgcattcactctggttatgaagctccccggatccccccggacaagagg
atcttcaccacacggcacactcccagctgcctcttccaggacgtggatgagagggccgcc
ccgctgctgggctacctcccccaggacctcctgggggccccagtgctcctcttcctgcat
ccggaggaccgacccctcatgctggccattcacaagaagatcctgcagctggccggccag
ccctttgaccactcccctattcgcttctgtgcccgtaacggggagtacgtcaccatggac
accagctgggctggtttcgtgcacccctggagccgcaaggtggcctttgtgttgggccgc
cacaaagtacgcacggcgcccctaaatgaagatgtattcactcccccggtccccagcccc
gctctgtccctggactctgacatccaagagctctcggagcagatccaccggctgctgtta
cagcctgtgcacagccccagccccacgggcctctgtggagtaggccccgtgccttcctct
ggccctctcctcagccctggctcctccagtgacagcaatgggggtgatgccgagggacct
gggcctcctgccccggtgaccttccagcagatctgtaaggatgtgcacctggtgaagcat
caggggcagcagctttttattgagtcccgggcccggcctctgccccggccccgtgtccct
gctactggcacattcaaggccaagacccttccctgcccatccccagacctggaggcgtcc
ccggctccaatccaggccccagtggccttggccgctgaggaggctgagcggaaagaagcc
tccagttgctcctaccagcagatcaactgcctggacagcatcctcaggtacctggagagc
tgtaacctccccggcacggcaaagcgcaaatgtgcctcctcctcttcctgcactgcctct
tcagcctccgacgacgacaagcagcgggcaggcccagtctctgtgggcaccaagaaagat
ccatcagcagtgctgcctggggagggggccacccctctgaaggagccggtggtgggagga
ggagccctgagcccgctcgccctggccaataaggcggagagcgtggtgtccatcaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggac
atcatcatgatggaggacctgcccagcctgcctcccggtccagctcccagcccagccccc
agtcctacagtagcccctgacccagccccagatgcctaccgcccagtgggcctgaccaag
gctgtgctgtccctgcacacacagaaggaggagcaggccttcctcagccgcttccgtgac
ttcagcaggctgcatggactggacagctcctccacagccccatcggcccctggcgagcga
ggctgccaccacagccttgccatccccggccgccgccaccactgccgatccaaagccaag
cgctcacgtcaccaccagacagctcgggctgaagcccccggctacgtctcccagccctcg
cctgtgccaccctctgccccctggcccccgccaccagccactcctcccttcccagctgtg
gttcagccataccctctccccgtgttccccccgagaggtggccctcagcctctccctcct
gctcccacatctgtgcctcctgcagctttccctgcccccctggtgacccccatggtggcc
ttggtgctccctaactatctgttccctaccccatccacctacccctacggggcaccccag
atgcctgccgaggggcctcctacccctgcctcccgctccccgtctccgtccctgccctcg
ctgccccccagccctccccaccgccccgactctccgctcttcaactcaagatgcagctcc
ccactccagctaaacctgctgcagcttgaggaggcccctcgcggtgaggggggtgcagcg
gcagggggctctgggagcagtgctgggcacccccctcccagcgaggagatggcagaacca
gaggccagactggcggaggtaactgagtcctccaaccaggatgctctctcgggctccagt
gacctgctggagttgctgctacaagaggactcacgatcaggcacgggctctgctgcctca
ggctccttgggctccggcttgggctctggttcaggctcccatgaagggggcagcacttcc
gccagcatcacgcgcagcagtcagagcagccacacgagcaagtactttggcagcatcgat
tcttcagaggctgaggctggggctgcccaggccaaggctgagcctgcggaccaggtcatt
aagtatgtgctccaggatcccatctggctgctcatggccaatgctgaccagcgtgtcatg
atgacttaccaggtgccctccaggcctgtgtggactgcggtagcagcacccaagagcctg
gccatcctgatgaccctctcttctcagaagtggatggactggggctggagcccatggagg
agggcggaggcgagggtggtggcggtggtggtgagggtgagggcagcgatgaggcccagg
cccaagctggggccagggtctcgagctctcaggacctggccatggaagaggaggagcaag
gtgggagctcacccagtccagccttacctaccacagaaaatggcaccagctagactccat
tttgggccacctccaggtgtgcatgagaagcttccttctctcatgccgcaactctcagaa
ctcagatgtggctggaccaaccaataa

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