Bubalus bubalis (water buffalo): 102408938
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Entry
102408938 CDS
T05912
Name
(RefSeq) TATA-box-binding protein-like isoform X2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03022
Basal transcription factors
bbub05016
Huntington disease
bbub05017
Spinocerebellar ataxia
bbub05165
Human papillomavirus infection
bbub05166
Human T-cell leukemia virus 1 infection
bbub05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102408938
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102408938
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
102408938
05165 Human papillomavirus infection
102408938
09164 Neurodegenerative disease
05016 Huntington disease
102408938
05017 Spinocerebellar ataxia
102408938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102408938
03021 Transcription machinery [BR:
bbub03021
]
102408938
Transcription factors [BR:
bbub03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
102408938
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102408938
RNA polymerase III system
TFIIIB
102408938
RNA polymerase I system
SL1/TIF-1B
102408938
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
102408938
NCBI-ProteinID:
XP_044781924
LinkDB
All DBs
Position
12:47527384..47532033
Genome browser
AA seq
262 aa
AA seq
DB search
MDRNDSLSLFDQYLASPQGAMSPGIPVFSPMMHYGTGLTPQPIQSADSLSTSEEEQQQTT
VGTGRLSTTSQQATQEASDQTPQLFDSQPLTTAPLLGTTPLYPSPMTHMIPMTPAMPASE
IAELVPQLHNIVCTVNLGCKLDLKSIALLARNAEYNPKRFAAVIMRIREPRTTALLFSSG
KMVCTGGKSEEQSRLAARKYARIIQKLGFPAKFLDFKIQNMVGSCDVKFPIRCKVDTFQI
GTEEDKYQQLEHRQQTLLDGFI
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatcggaatgatagcctctctctgtttgaccagtatctggcctcccctcaaggtgcc
atgagtcctggaatccctgtcttcagtccaatgatgcattatggcacaggactgactccg
cagccaattcagagcgccgacagtctgtctacttcagaggaggagcagcagcagacgacg
gtgggaacaggtcggctttcaacgacgtcccagcaggcaacccaggaggcctcggaccag
acaccacagctcttcgactcacagcctcttacgactgcacccttgctgggtaccactccc
ttgtatccatcccccatgacccacatgatccccatgacccctgccatgccagcctcagag
atcgctgagttggtgccacagctgcacaatattgtatgcacagtgaatcttggctgtaaa
cttgacctaaagagcattgcccttcttgctcgaaatgctgaatataatcccaagaggttt
gctgctgtaatcatgagaataagagagccccggaccactgcacttttattcagttctggg
aagatggtgtgcacaggaggcaagagtgaagaacagtccaggctagcagcaagaaaatac
gccagaatcatacagaagttgggttttccagctaagttcttggacttcaagattcagaac
atggtggggagctgtgatgtgaagttccccataaggtgtaaagtagacacattccaaata
ggaacagaagaagacaaatatcaacaactggaacaccgacagcagacactcttggacgga
ttcatctga
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integrated database retrieval system
