Bubalus bubalis (water buffalo): 102409055
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Entry
102409055 CDS
T05912
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04120
Ubiquitin mediated proteolysis
bbub04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102409055 (UBE4B)
04120 Ubiquitin mediated proteolysis
102409055 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbub04121
]
102409055 (UBE4B)
Enzymes [BR:
bbub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102409055 (UBE4B)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
U-box type E3
102409055 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
102409055
NCBI-ProteinID:
XP_006076769
LinkDB
All DBs
Position
5:37531334..37653074
Genome browser
AA seq
1360 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIAATARSPD
RNLMLTTGSNPGTSPMFCNLGSFGASSLSSLYETSPAPNTSVWSSVPMMSPPLASPSRAA
SQAAAPPASSLCLPGPAGTPAGSQPSSPRYRPYTVTHPSGSTSAPASRSSVTSILSSSPG
LSAPASSPQAVPTSSSRQRPPGTGPPLLSASPGGSAPSRRPSSLRNSPSMYDSPFSFLFL
ALSGDSSDEDEEDDDDDGDDEGGGGGDEFSCVQFGSSLGASGGASTWDSYSDHFTIETCK
ETDMLNYLIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSL
QQPSFLVPYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFK
YPLMALGELCETKFGKTHPVCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAE
DDAKVVEKYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMA
AVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITLPN
DETRVNATMEDVNDWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRA
IRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRR
CLNFYGLLIQLLLRLLDPAYPDVTLPLNSDVPKVFAALPEFYVEDVAEFLFFIVQYSPQV
LYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLS
TKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQ
FVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERV
SRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPE
KYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIE
KFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHL
LNSPTDPFNRQTLTESMLEPVPELKEQIHAWMREKQNSDH
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgacggaggcgccttgcacgacttgctggtgga
cagacctcccagcctaccacccctctcacttctccccagagggagaacccccccgggcct
cccatagcagcatcagctccaggcccctcccagagccttggtctcaacgtccacaacatg
acccccgctacctcccccattggtgcatcaggagtagcccatcgaagccagagcagtgag
ggagtcagttctctcagcagctcgccctccaatagccttgaaacgcaatcccagtctctc
tcacgttcccagagcatggatatcgatggagtctcttgtgagaaaagcatgtcccaggtg
gatgtggattcaggaatcgaaaatatggaggttgatgaaaatgaccgaagagaaaaaagg
agcctcagcgataaggagccttcatcaggttctgaagtgtctgaagagcaggccttacag
ctggtctgtaagattttccgtgtctcctggaaggaccgggacagggatgtgatcttcctt
tcttctctttctgcacagtttaagcagaacccgaaagaagtgttctctgattttaaggac
ttgattggccagattttaatggaagtgctaatgatgtctactcagaccagagatgaaaac
ccgtttgcaagcctgacagccacctcccagccgattgcagcaacagctcggtcaccagac
agaaacctcatgctgaccaccggctccaacccaggaacgagccccatgttctgcaacctg
ggttccttcggggccagctctttatctagcctctatgagactagcccagctcccaatacc
agtgtctggagctctgtgccaatgatgagtccgcctctggcctccccctcccgggcagcc
agccaggcggctgcgcctcccgcttcttccctctgtctgcctggccctgcggggacgcct
gcgggaagccagccctcgtctccgcggtaccggccctacactgtcacccacccctcgggg
tctacatctgctcctgcctcgcgatcctcggtcacctccatcctgtctagctccccaggc
ctgtccgccccggccagtagccctcaagccgtgcccaccagctcctcccgacagagaccc
cctggcacaggaccacctttactctctgcctcccccggtgggagtgcccccagcagacgg
ccctcctccctaaggaactctcctagtatgtacgacagtcctttctccttcctcttcctc
gcactttctggggacagtagtgatgaagatgaagaagatgatgatgatgatggtgatgat
gaaggtggtggtggtggtgatgagttttcttgtgtccagtttgggtccagtctgggagcc
tctggtggggcaagtacttgggattcctacagcgaccatttcaccattgaaacgtgcaag
gagacagacatgctgaactacctcatcgagtgttttgaccgagttggaatagaggaaaaa
aaagcaccaaagatgtgcagccagccagcagtcagccagcttctgagcaacatccgctca
cagtgcatatcccacactgcattagtactccaggggtccctcacacagccaaggtccctg
cagcagccgtccttcctcgtgccgtacatgttgtgtaggaacctcccatatggcttcatc
caggagctggtgagaaccactcaccaggatgaagaagtgttcaagcagatctttatcccc
attttacaaggcctggctcttgctgccaaagagtgctccctcgatagtgactactttaaa
taccccctcatggctttaggtgagctctgtgaaaccaagtttggaaagacacaccctgta
tgcaatttggtcgcttctttgccgttgtggttacctaagtctttaagccctggctctggg
cgggagctgcagagactctcgtacctgggggctttcttcagcttctccgtctttgcagaa
gatgatgcgaaagtggtggaaaaatatttctcagggcccgccattaccctggaaaacact
cgagtggtgagccagtcgctgcagcattacttggagctgggaaggcaagagcttttcaag
atccttcatagtatcttgttaaatggtgaaacccgtgaggccgctcttagttacatggca
gctgtcgtcaatgccaatatgaagaaagcacagatgcagacagacgataggttggtgtca
acggacggattcatgctgaatttcctttgggtgctgcagcaacttagtacaaagatcaag
ttagagacagtcgaccccacgtacattttccacccaaggtgtcggatcacgcttcccaac
gacgagaccagagtgaatgcaacgatggaagacgtgaatgactggctggctgaactttat
ggagatcagcctccattttctgagccgaaattccctacggaatgcttctttctcaccctg
cacgcccaccacctctcaattctgcccagctgccgtcgctacatccgcagactgcgggcc
atccgggagctcaatagaaccgtggaagatctgaaaaataatgaaagccaatggaaagac
tccccactggcaaccagacaccgtgaaatgctgaaacgctgcaaaactcagcttaagaaa
ctggtacgatgcaaggcctgtgctgatgctggcttgcttgatgagagctttctgagaaga
tgtctgaacttctacggccttctcattcagctgctgctccgcctcctggaccctgcctac
ccggatgtaacactgcctttaaattcagatgtccccaaggtatttgcagcattgcctgag
ttttatgtagaagatgttgctgaatttttattttttattgtacaatactctcctcaggtg
ctttacgagccctgcactcaggatattgtgatgttccttgtcgtgatgttgtgtaaccag
aactacatccgaaatccgtatctggtggccaaactggtagaagtcatgttcatgaccaac
cctgctgttcagccaaggacccagaagttttttgaaatgatcgagaaccatcccctctcc
accaagttattggtcccttccctgatgaagttttatacagacgttgagcacaccggcgcc
accagtgagttctacgacaagttcaccattcgctatcatattagcaccatttttaaaagc
ctttggcaaaacatagctcaccacggcacctttatggaggagttcaattctgggaagcag
tttgtccgctatataaacatgctgataaacgacacgacgttcttgctcgatgagagtctg
gagtctctgaagcggatccacgaagtgcaggaggagatgaagaacaaagaacagtgggac
cagctgccccgggatcagcagcaggctcgccagtcccagctcgctcaggacgagcgcgtt
tcgcgctcctatcttgccctggcgacggagacggtggacatgttccatatcctcaccaag
caggtccagaagccgttcctgagacctgaacttggaccccgattggccgcgatgctgaac
ttcaatcttcagcaactctgtggcccgaagtgccgtgacctgaaagttgaaaaccccgag
aaatatggctttgaaccaaagaagctgttggaccaactgaccgatatttacttgcagctg
gactgtgcccggttcgcgaaagccatcgctgacgaccagagatcctacagcaaagagttg
tttgaagaagttatttcaaaaatgcggaaggcaggaatcaaatccaccatagcgatagag
aagttcaagcttctggctgagaaagtagaggagattgtggctaagaatgcacgggcagag
attgactacagtgatgccccagacgagttcagagaccctctaatggacaccctgatgact
gaccccgtgcgactgccctccggcaccatcatggaccgctccatcatcctgcggcacttg
ctgaactcccccacggaccccttcaaccggcagacgctgacagagagcatgctggaacca
gtgccagaactgaaagaacagattcatgcctggatgagagagaaacagaacagtgatcac
taa
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