Bubalus bubalis (water buffalo): 102409172
Help
Entry
102409172 CDS
T05912
Symbol
CNTN5
Name
(RefSeq) contactin-5
KO
K06761
contactin 3/4/5/6
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102409172 (CNTN5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
bbub00537
]
102409172 (CNTN5)
Cell adhesion molecules [BR:
bbub04515
]
Immunoglobulin superfamily
Contactins
102409172 (CNTN5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
bbub00537
]
Others
102409172 (CNTN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
Pur_ac_phosph_N
C2-set
Motif
Other DBs
NCBI-GeneID:
102409172
NCBI-ProteinID:
XP_025122772
LinkDB
All DBs
Position
16:75096511..76782601
Genome browser
AA seq
1099 aa
AA seq
DB search
MASSWKLILFLSVTGCLSEYSGALPGLPTSYAALQRIKKSSSSSLYGSRTRPRYSSPSLG
TLSVSSPSWRGAPQHYYSPINLYHPSDAFKQDESVDYGPVFVQEPDDIIFPTDSDEKKVA
LNCEARGNPIPNYRWLRNGTEIDLESDYRYSLIDGAFIISNPSEAKDSGHYQCLAANTFG
SILSREVILQFAYLGNFSGRTRSAVSVREGQGVVLLCSPPPHSPEIIYSWVFNEFPSFVA
EDSRRFISQETGNLYISKVQTSDVGSYICLVKNTVTNARVLSPPTPLTLRNDGVMGEYEP
KIEVHFPFTVTAAKGTTVKMECFALGNPVPTITWMKINGYIPSKSRLRKSQAVLEIPNVQ
LDDAGIYECRAENSRGKNSFRGQLQVYTYPHWVEKLNDTQLDSGSPLRWECKATGKPRPT
YRWLKNGLPLLLQSRIEMVNGVLMIHNVNQSDAGMYQCLAENKYGTIYASAELKILASAP
TFALNQLKKTIIIPKDQEVIIECKPQGSPKPTISWKKGDKAVRENKRIAILPDGSLRILN
ASKSDEGKYICRGENVFGSAEITATVSVKEPTRIELTPKRTELTVGESIVLNCKAIHDPS
LDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVS
DEAELLVRGPPGPPGIVIVEEITESTATLSWSPAADNHSPISSYNLQARSPFSLGWQTVK
TVPEIITGDMESAMAVELNPWVEYEFRVVATNPIGTGDPSTPSRMIRTNEAVPKTAPTNV
SGRSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSDASKFIYRDES
VPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVKATSVSVSEILVAWKHIK
ESLGRPQGFEIGYRKDMEQEDAAETIKTRGNESSIILTGLEGNTLYHFTVRAYNGAGYGP
PSSEVSAATKKSPPSQAPNNLRWEQQGSQLSLGWDPVRPLANESEVMGYKVFYRQEGHSN
SQVIETQKPQAVVPLPDAGVYIIEVRAYGEGGDGTASSQIRVPSYSGGKITSAQSALHTL
SISPSVTLLLALMIPSTLW
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcttggaaacttattctgtttctgtcagtcactgggtgtctttcagaatat
tctggagctcttcctggcctccctacttcatatgctgctttgcaaagaattaagaagagt
tcctcttcatccctgtatggttcaaggactagaccacgatacagtagcccttcattagga
acgctgagcgtttcttcaccgagctggcgaggggcacctcaacattattattcccccatc
aatctttatcatccctcagatgccttcaaacaagatgaaagtgtggattacggaccagtg
tttgtgcaagaaccagatgatataattttcccgactgattctgatgaaaagaaagtagca
ctgaattgtgaagctcgtggcaacccaattcccaattacagatggcttcgaaatggaaca
gaaatagatttggaaagtgattatcgctacagtttgatagacggggcctttattataagc
aatccaagtgaagcaaaggattctggtcattatcagtgtttggcagccaacacatttgga
agtattcttagtcgagaagtcattcttcagtttgcctatctggggaactttagtggccgg
acgagaagcgcggtgtccgtgcgggaaggccaaggggtcgtcctcctatgctcgccgcca
cctcactcgccagaaatcatctatagctgggtatttaatgagttcccttcctttgtggcc
gaagacagccggcggttcatttcccaggagacagggaacctttatatttctaaagtccaa
acatcagatgttggcagctatatttgtctggtgaaaaacacagtgacgaatgctcgagta
cttagtcctccaacaccactgactctgcgtaatgatggtgtgatgggagaatatgagccg
aaaattgaggtccatttccctttcacggttacagctgctaagggaacaactgttaagatg
gaatgctttgcacttggcaacccagttccaacaatcacatggatgaagattaatggttat
attcctagtaagtcacgtctgcgtaaatctcaggcagtactggaaatacccaacgtgcag
ctggacgatgcaggcatatatgagtgcagagctgaaaactcacgtggaaagaattccttt
cgtggacagttgcaagtatacacatatccacactgggtagaaaaactgaatgatactcag
ttagacagtgggagccctctgcgatgggaatgtaaggctactggaaaacccagacccacc
taccgctggctgaagaatggactacccctcttgcttcagagtaggattgagatggttaat
ggagtattgatgatccacaacgtgaatcaatcagatgctggaatgtatcagtgtttggct
gaaaataaatacggaaccatttatgcaagtgctgagctgaagattttagcttcagctccc
acttttgcactgaatcaactgaagaaaacaataattatccccaaagaccaagaagtcatc
atagagtgcaaacctcaaggatctccaaaaccaactatctcttggaagaagggagacaaa
gcagttagagaaaataaaagaatagctattcttccagacgggagtctccggatcctcaat
gcttctaaatcagatgagggaaagtacatttgccgaggggaaaatgtctttggctctgct
gaaatcacagctacagtatctgtaaaagaacctacaagaatagagcttactcctaaaaga
acagagttaacagtgggagaaagcattgtccttaattgcaaagcaattcacgatcctagc
ttggatgtcactttctactggacactgaaaggacagcctatcgatttcgaaaaggaaggt
ggacattttgaaagcatcagggcccaagcatcctctgcagatttaatgatcaggaacatc
cttctgatgcatgctgggagatatggctgcagggtacagaccacagcagacagtgtgtca
gatgaggcagaacttcttgttaggggtcccccaggcccaccagggatagtgattgtggag
gaaatcaccgagagcacagccacactctcctggagtccagccgctgacaaccacagcccc
atctcttcctacaaccttcaggctcgtagccccttctccctgggctggcaaacggtaaaa
acagtcccagaaatcataacaggggacatggagtcagccatggcggtggagctgaacccc
tgggtagaatatgaattcagagtggtggccaccaatccaattgggactggagacccaagc
actccatctcgaatgatccgcacaaatgaagcagttccaaagacagcacctaccaatgta
agtggaagaagtggaagaaggcacgagttggtcatcgcctgggagccagtatctgaagag
tttcagaatggggaaggctttggctatattgtggctttcaggcccaatggaacacgtggc
tggaaggaaaaaatggtgacatcctctgatgcttcaaaattcatctatcgagatgaaagt
gtccctcctcttaccccctttgaagtgaaggttggcgtttataacaataaaggggatgga
cccttcagtcaaattgttgtcatatgttcagctgaaggagaacccactgctgctcccaca
gatgtcaaggctacaagtgtatctgtgtcagagattcttgttgcatggaaacatattaaa
gagagtctaggaagaccacagggatttgagattggttatcggaaagacatggaacaagaa
gatgcagcagaaaccatcaaaacgagggggaatgagtcatccatcatcctgacagggtta
gaaggaaatacattatatcacttcacagtgagggcttataatggagctggatatgggcca
cccagcagtgaagtgagtgcagccaccaagaaatccccccccagtcaagcacctaacaac
ctcaggtgggagcaacagggctctcagctttctctgggctgggaccccgtcagaccatta
gccaacgagtctgaagtcatgggctacaaggttttttataggcaagagggtcacagcaac
agtcaagttattgaaacacagaaacctcaagcagtagtcccactccccgatgctggagtc
tatatcattgaagtgcgagcatatggtgaaggaggggatggaaccgctagttcccaaatc
agggtcccatcatattcaggtgggaaaatcactagtgctcagtcagccctccatactctc
tccatatctccatcagtaacattgcttttggcattgatgattccttcaactctttggtga
DBGET
integrated database retrieval system
