Bubalus bubalis (water buffalo): 102409188 Help Entry 102409188         CDS       T05912                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub03040   Spliceosome Brite KEGG Orthology (KO) [BR:bbub00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     102409188 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bbub03021]     102409188 (SF3B3)    03041 Spliceosome [BR:bbub03041]     102409188 (SF3B3)    03036 Chromosome and associated proteins [BR:bbub03036]     102409188 (SF3B3) Transcription machinery [BR:bbub03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      102409188 (SF3B3) Spliceosome [BR:bbub03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     102409188 (SF3B3)  Complex B     102409188 (SF3B3)  Complex C    U2 SnRNP specific factors     102409188 (SF3B3) Chromosome and associated proteins [BR:bbub03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      102409188 (SF3B3)     TFTC complex      102409188 (SF3B3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  102409188 NCBI-ProteinID:  XP_025124154 LinkDB All DBs Position 18:complement(1302840..1341763) Genome browser AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG DDWHVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgttcctgtacaacttgaccttgcagcgagccactggcatcagctttgccattcatggc aacttctctggaaccaaacaacaggaaattgttgtttcccgaggaaagatcttggagctg cttcgccctgatcccaacactggcaaagtgcacactctactaactgtggaagtatttggt gtcatccggtcgctcatggcctttaggttgacgggtggcacaaaagactacattgtggtt ggcagtgactcaggtcggattgttatcctggaataccagccatctaagaatatgtttgag aagattcaccaagaaacctttggcaagagtggatgccgccgcattgttcccggccagttc ttagctgtggatcccaaagggcgagctgttatgattagtgccattgagaaacagaaattg gtgtatatcttgaacagagatgctgcagcccgacttaccatctcatctccactggaggct cacaaagcaaacactttagtgtatcacgtagttggagtagatgtgggatttgaaaatcca atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaactggggaagca gcagctaatacccagcagacgcttactttctatgaattagaccttggtttaaatcacgta gtccgaaaatacagtgagcctttggaggaacatggaaacttcctaattacagttccaggg ggatcagatggtccaagtggagtgctgatttgctctgaaaactacattacctataagaac tttggtgaccaaccggatatccgctgtccaattcccaggagacggaatgacctggatgac cctgaaagaggaatgatttttgtctgctctgccacccataagaccaaatcaatgtttttc tttttggctcaaactgagcagggagatatctttaagatcactttggagacagacgaagat atggttactgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaaccattacttatatcaa atcgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctagaa gaaggagacacattcttctttcagccaagaccactgaaaaaccttgtgttggttgatgaa ttggacagcctctctcccattttgttttgccagatagctgatctggccaacgaagacact ccccagctatatgtggcctgtggtaggggaccgcggtcatctctgagagtcttaaggcat ggacttgaggtatcagaaatggctgtctccgagcttcccggtaaccccaacgctgtctgg acagtgcgtcggcacattgaagatgagtttgatgcctacatcattgtgtccttcgtgaat gccacactggtgttgtccatcggagagactgtagaagaagtgacagactcggggtttctg ggcaccacccctaccttgtcctgctccttgctaggagatgatgccttggtgcaggtgtac cctgatgggattcggcacatccgagcagacaagcgagtcaatgagtggaagactcctggg aagaaaacaattgtgaaatgtgcggtcaaccagcgacaagtggtgatcgccctaacagga ggagagctggtctattttgaaatggatccctcaggacagctgaacgagtacacggagcgg aaggagatgtcagcagatgtggtgtgcatgagtctggccaatgtgccccctggagagcag cggtctcgctttctggctgtggggctggtggacaacactgtcaggatcatctccttggac ccctcagactgtttgcagcctttgagcatgcaggctctcccggcccagcctgagtccttg tgtattgtggaaatgggtgggactgagaagcaggatgagctgggggagagaggctctatt ggcttcctgtacctgaatattggactccagaacggtgtgctgctgagaactgtcctggac cctgtcactggggacctgtctgacacccgcactaggtacctggggtcccgtcctgtgaag ctctttcgtgtccggatgcaaggccaggaggcagtgctggccatgtcaagccgctcatgg ttgagctattcttaccagtctcgtttccatctcacgcccctgtcttatgagaccctggag tttgcctctggcttcgcctctgaacagtgccctgaaggcattgtggccatctccaccaac accctgaggattttggcgttggagaagctgggtgctgtcttcaatcaagtagcctttcca ctgcagtacacacccaggaaattcgtcatccaccctgaaagtaacaaccttatcatcatc gagactgaccacaatgcctacactgaggccactaaagctcagaggaagcagcagatggca gaggaaatggtagaagcagcaggggaggatgagcgagagctggccgcagagatggcagca gcattcctcaatgaaaacctccctgagtccatttttggggctcctaaggccggcaatggg cagtgggcctctgtgatccgagtgatgaatcctattcaggggaacacattggatcttgtc cagctggaacagaatgaagccgcttttagcgtggctgtgtgccggttctccaacactggt gatgactggcatgtgctggtgggtgtggctaaagacctgatactgaacccccgatctgtc gctgggggctttgtctatacctacaagctcgtgaacaatggggaaaaactggagtttttg cacaagactccggtggaagaggtccctgctgctattgcccctttccaagggagagtgttg attggtgtgggaaaacttctgcgagtctatgacctcggaaagaagaagttactccgcaag tgtgagaacaagcatatcgccaactacatctctgggatccagacaattggacacagggta attgtatctgatgtccaagaaagtttcatctgggttcgctacaagcgtaatgagaaccag ctcatcatctttgctgatgatacctacccccgatgggtgaccacagctagtctcctcgac tacgatactgtggctggggcagacaagtttggcaacatttgtgtggtgcggctcccaccc aacaccaatgatgaagtggacgaggatcccactggaaacaaagccctgtgggaccggggc ttgctcaacggggcctctcagaaggcagaagtgataatgaactatcacgtgggcgagaca gtgctctccttacagaagaccacactgatccctggaggctcagagtcgcttgtctacacc accttgtcaggaggcattggcatccttgtcccattcacatcccatgaggaccatgacttc ttccagcatgtagaaatgcacctccggtccgagcacccccctctctgtgggcgagaccac ctcagctttcgttcctactatttccctgttaagaatgtgattgatggagatctctgtgaa cagttcaactccatggagcccaacaaacaaaagaatgtgtctgaagaactggaccgaacc ccacctgaggtgtccaagaagcttgaggacatacggactcgctatgccttctga

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