Bubalus bubalis (water buffalo): 102409299
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Entry
102409299 CDS
T05912
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102409299 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102409299 (DHX36)
03012 Translation factors [BR:
bbub03012
]
102409299 (DHX36)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102409299 (DHX36)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102409299 (DHX36)
Translation factors [BR:
bbub03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102409299 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
AAA_34
NPHP3_N
AAA_23
DUF6782
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
102409299
NCBI-ProteinID:
XP_025145299
LinkDB
All DBs
Position
1:158335134..158381417
Genome browser
AA seq
1010 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSGGGYGGSYGGNHGGSHGGNRGSGGGGGGGGGRGGRGRHPGHL
KGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQTKNDKDEEAQISWF
APEDHGYGTEAPAENKPNSVKNVEHQEKKMINQEKRPFRIRDKYIDRDSEYLLQENEPDA
TLDQQLLEDLQKKKTDLRYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTT
QVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQS
RLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRP
DLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQF
KKGFMQGHVNRQEKEEKEAIYKERWPGYLRELRQRYSAGTVDVVEMMDDEKVDLNLIAAL
IRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFK
RTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQ
RKGRAGRVQPGHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRL
MDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPV
LTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEK
DYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAG
LYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFNYNWLMYHLKMRTSSIY
LYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELDILLQ
EKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQEKATPRNLPPRFQDGYYS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggtggcccccgcagctctggcggg
ggttacggaggaagctatggaggcaaccatggaggaagccatgggggtaaccgaggctcc
ggaggtggcggcggcggaggtggtggtcgaggcggccgaggccgacatcccgggcacctg
aaaggccgcgaaattggcttatggtacgcgaagaaacaaggccagaagaacaaggaagca
gagaggcaggagagagctgtagtacatatggatgaacgtcgagaagaacaaattgtgcag
ctgctacattctgtgcaaactaagaatgataaagatgaagaagcacagatatcctggttt
gctcctgaagatcatggatacggtactgaagctcctgctgagaacaaaccaaattcagta
aagaatgtggagcatcaggaaaaaaaaatgataaatcaagaaaagaggccatttagaatc
agagacaaatacattgatcgtgattctgaatatctcttgcaagaaaatgaaccagatgca
actctagaccaacaattattggaagatttacaaaagaaaaaaactgaccttcggtatatt
gaaatgcagcgtttcagggaaaagctgccatcatatggaatgcaaaaggaattggtaaat
atgattgataaccatcaggtaacagtgataagtggtgaaaccggttgtggaaaaaccact
caagttactcagttcattttggataactacattgaaagaggaaaaggatctgcttgtagg
atagtttgtactcagccaagaagaattagtgccatttcagttgcagagagagtggctgca
gaaagggcggaatcttgtggcaatggtaatagtactggataccaaattcggctccagagt
cggttgccaaggaaacaaggttctatcttatattgtacaacaggaatcatccttcagtgg
cttcagtcagacccccatctgtccagtgttagtcacatcgtgcttgatgaaatccatgag
agaaatctacagtcagatgttttaatgactgttgttaaagatcttctcagttatcgacct
gacctgaaagtagtattgatgagcgcaacattgaatgctgagaaattttccgaatatttt
ggtaactgtccaatgatacatatacctggctttacttttccggttgtggagtatcttttg
gaagatataattgaaaaaataagatatgttccagaacaaaaagaacacagatcccagttt
aagaaaggtttcatgcaagggcatgtgaatagacaagaaaaagaagaaaaagaagcaatc
tataaagaacgctggccaggttatctaagggaattgagacaaaggtattctgcaggcact
gtagatgttgtagaaatgatggatgatgaaaaagttgatctgaatttgattgctgccctt
attcgatacattgttttggaagaagaggatggtgcaatattggtctttctaccaggctgg
gacaacatcagcactttacacgatctcttgatgtcacaagtgatgtttaaatcagacaag
tttattattatacctttacattctctgatgcctacagttaaccagacacaggtgtttaaa
agaactcctcctggtgttcggaaaatagttattgctaccaacattgcagagactagcatt
accattgatgatgtagtttatgtaatagatggaggaaaaataaaggagacgcactttgac
acacaaaacaacatcagtacaatgtctgctgagtgggttagtaaagccaacgctaaacag
aggaaaggtagagctggaagagttcaacctggtcattgctatcatctatataacagtctt
agagcaagccttctagatgactatcaactgccagaaattttaagaacgcctttggaagaa
ctttgtttacagataaagattttaagactaggtggaattgctcactttcttagtaggcta
atggatccaccatcgaatgaagcagtgttactctccataaaacacctgatggaactgaat
gctctggataaacaagaagaattgacacctcttggagttcacttggcacgattaccagtt
gagccacacattgggaaaatgattctttttggagctctgttctgttgcttagacccggta
ctcaccattgctgctagtctcagcttcaaagatccctttgtgattccgctgggaaaagaa
aaggtcgcagatgcaagaagaaaggaattggcaaaggatactaaaagtgaccacctgact
gtcgtgaatgcatttaagggatgggaaaaagctaaacaacgtggtttcagatatgaaaaa
gactattgctgggaatattttctatcctcaaacacattgcagatgctgcataacatgaaa
gggcagtttgctgagcatcttcttggagctggatttgtaagcagtagaaatcctcaagat
ccagaatctaatataaattcagataatgagaagataattaaagctgtcatctgtgctggt
ttatatcccaaagttgctaaaatccggctaaatttgggtaaaaaaagaaaaatggtgaaa
gtttacacaaaaactgatggagtagttgctattcatcctaaatctgttaatgtggaacaa
actgagtttaactacaactggcttatgtatcacctgaagatgaggacaagtagtatatac
ttgtatgactgcacagaggtttccccatactgtctcttgttctttggaggtgatatatcc
atccagaaggataatgatcaggaaactattgctgtagatgagtggataatctttcagtct
ccagcaagaattgcccatcttgttaaggaattaagaaaggaactagatatccttctgcaa
gagaagattgaaagtccccatcctgtagactggaaggacactaaatcaagagactgtgca
gtactctcagctattatagacttgatcaaaacacaagaaaaagcaactcccaggaacttg
ccaccacgtttccaggatggatattacagctga
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