Bubalus bubalis (water buffalo): 102409328
Help
Entry
102409328 CDS
T05912
Name
(RefSeq) glial fibrillary acidic protein isoform X1
KO
K05640
glial fibrillary acidic protein
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04630
JAK-STAT signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
102409328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102409328
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bbub04812
]
102409328
Membrane trafficking [BR:
bbub04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
102409328
Cytoskeleton proteins [BR:
bbub04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
102409328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF7918
CCDC89
CCDC57_N
Motif
Other DBs
NCBI-GeneID:
102409328
NCBI-ProteinID:
XP_006045619
LinkDB
All DBs
Position
3:18444769..18454149
Genome browser
AA seq
468 aa
AA seq
DB search
MERRRVTSATRRSYVSSSEMVVGGRRLGPGTRLSLARMPPPLPARVDFSLAGALNSGFKE
TRASERAEMMELNDRFASYIEKVRFLEQQNKALAAELNQLRAKEPTKLADVYQAELRELR
LRLDQLTANSARLEVERDNLAQDLGTLRQKLQDETNQRLEAENNLAAYRQEADEATLARL
DLERKIESLEEEIRFLRKIHEEEVRELQEQLAQQQVHVEMDVAKPDLTAALREIRTQYEA
VASSNMHEAEEWYRSKFADLNDAAARNAELLRQAKHEANDYRRQLQALTCDLESLRGTNE
SLERQMREQEERHVREAASYQEALARLEEEGQSLKDEMARHLQEYQDLLNVKLALDIEIA
TYRKLLEGEENRITIPVQTFSNLQIRGGKSTKEGESHKVTRHLKSLTIQVIPIQAHKVVD
GAPPALETSLDTKSVSEGHLKRNIVVKTVEMRDGEVIKESKQEHKDVM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagacgggtcacctcagccactcgccgctcctatgtctcctcctcggagatg
gtggtggggggccgccgcttgggtcccggcacccgcctgtccctggctcgaatgccgcct
ccactcccagcccgggtggacttctccctggctggggcactcaactccggcttcaaagag
acccgagccagcgagagggcagagatgatggagctcaatgaccgcttcgccagctacatt
gagaaggtgcgcttcctggagcagcagaacaaggcgctggctgccgagctcaaccagctg
cgggccaaggagcccaccaagctggccgacgtctaccaggcggagctgcgcgagctgcgc
ctgcggctcgatcaactcactgccaacagcgcccggctcgaggtggagagggacaacctg
gcacaggacctgggcaccttgaggcagaagctccaggatgaaaccaaccagaggctggag
gctgagaacaacctggctgcctatcgacaggaagcagatgaagccaccctagcccgtctg
gatctggagaggaagattgagtctctggaggaggaaatccggttcttgaggaagatccat
gaggaggaggtgcgggagctccaggagcagctggcccagcagcaggtccacgtggagatg
gatgtagccaagcctgacctcacagcggccctgagagagatccgcacacagtatgaggca
gtggcgtccagcaacatgcatgaggcagaggagtggtaccggtccaagtttgcggacctg
aacgacgccgccgcccgcaacgcggagctgctccgccaggccaagcatgaggccaacgac
taccggcggcagctgcaggccttgacctgcgacctggagtccttgcgcggcacgaacgag
tccctggagcggcagatgcgcgagcaagaggagcgccacgtgcgggaggcggcgagttac
caggaggcactggcccggctggaggaagaggggcagagcctcaaggacgagatggcgcgc
cacctgcaggaataccaggatctgctcaacgtcaaactggccctggacatcgagatcgcc
acctacaggaagctgctggagggcgaggagaaccgcatcaccattcctgtgcagaccttc
tccaacctgcagattcgagggggcaaaagcaccaaagaaggggaaagtcacaaggtcaca
agacatctcaaaagcctcacaatacaagttataccaattcaggctcacaaggttgtagat
ggagccccgccggctctcgaaaccagcctggacaccaagtccgtgtcagaaggccacctc
aagaggaacattgtggtgaagaccgtggagatgcgggatggagaggtcattaaggagtcc
aagcaggagcacaaggatgtgatgtga
DBGET
integrated database retrieval system
