Bubalus bubalis (water buffalo): 102409382
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Entry
102409382 CDS
T05912
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05014
Amyotrophic lateral sclerosis
bbub05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102409382 (NEFM)
05022 Pathways of neurodegeneration - multiple diseases
102409382 (NEFM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bbub04812
]
102409382 (NEFM)
Cytoskeleton proteins [BR:
bbub04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
102409382 (NEFM)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
ATG14
Extensin_1
Motif
Other DBs
NCBI-GeneID:
102409382
NCBI-ProteinID:
XP_006055222
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Position
3:133833774..133839268
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AA seq
904 aa
AA seq
DB search
MSYTLDSLGNPSAYRRVTETRSSFSRISGSPSSGFRSQSWSRGSPSTVSSSYKRSTLAPR
LAYSSAMLSSAESSLDFSQSSSLLNGGSGPGGDYKLSRSNEKEQLQGLNDRFAGYIEKVH
YLEQQNKEIEAEIQALRQKQASHAQLGDAYDQEIRELRATLEMVNHEKAQVQLDSDHLEE
DIHRLKERFEEEARLRDDTEAAIRALRKDIEESSMVKVELDKKVQSLQDEVAFLRSNHEE
EVADLLAQIQASHITVERKDYLKTDISTALKEIRSQLECHSDQNMHQAEEWFKSRYAKLT
EAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQ
DTIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFAGSIT
GPLYTHRQPSIAISSKIQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITKE
LAVSMKEEVKEEEAEEKEEKEEAEEEVVAAKKSPVKATAPELKEEEGEKEEEEGQEEEEE
EEEAAKSDQAEEGGSEKEASSEKEEGEQEEEGETEAEGEGEEAAAEAKEEKKMEEKAEEV
APKEELVAEAKVEKPEKAKSPVTKSPTTKSPTAKSPEAKSPTAKSPTAKSPVAKSPTAKS
PSAKSPTAKSPAAKSPVEEVKPKAEAGAEKGEQKEKVEEEKKEAKESPKEEKAEKKEEKA
KDVPEKKKAESPVKAESPVKEEVPAKPVKVSPEKEAKEEEKPQEKEKEKVEEVGGKEEGG
LKEFRKEDIAINGEVEGKEEEQETKEKGSGGEEEKGVVTNGLDVSPADEKKGGDKSEEKV
VVTKMVEKITSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEKVTSHAIVKEV
TQSD
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacgttggactcgctgggcaacccgtccgcctaccggcgggtgaccgaaacc
cgctcgagcttcagccgcatcagcggctccccgtccagcggcttccgttcgcagtcgtgg
tcccgcggctcgcccagcaccgtgtcctcctcctacaagcgcagcacgctggccccgcgc
ctcgcctacagctccgccatgctcagctcggccgagagcagcctcgacttcagccagtcc
tcgtctctgcttaacggcggttctgggcctggaggcgactacaagctgtcccgctccaac
gagaaggagcagctgcagggtctgaacgaccgcttcgcgggctacatcgagaaggtccac
tacctggagcagcagaacaaggagatcgaggcggagatccaggcgctgcggcagaagcag
gcctcgcacgcccagctgggcgacgcgtacgaccaggaaatccgcgagctacgcgccacc
ctggagatggtgaaccacgagaaggctcaggtacagctggactcggaccacctggaagag
gatatccaccggctcaaagagcgcttcgaggaggaggcacggctgcgcgacgacaccgag
gcggctatccgcgcgctacgcaaagatatcgaggagtcgtcgatggtcaaggtggagctg
gacaagaaggtgcagtcgctgcaggatgaggtggccttcctgcggagcaatcacgaggag
gaggtggccgacctgctggcccagatccaagcgtcacacatcaccgtggagcgcaaagac
tacctgaagacggacatctcgacggcgctgaaagagatccgctcccagctcgagtgtcac
tccgaccagaacatgcaccaggccgaagagtggtttaagagccgctacgccaagctcacc
gaggcggccgagcagaacaaggaagccatccgctccgccaaggaagagatcgccgagtac
cggcgccagctgcagtccaagagcatcgagctcgagtcagtgcgcggcaccaaggagtcc
ctggagcggcagctcagcgacatcgaggagcgccacaaccacgaccttagcagctaccag
gacaccatccagcagctggaaaatgagcttcggggcacaaagtgggaaatggctcgtcat
ctgcgagaataccaggatctcctcaacgtcaagatggctctggatattgagatcgccgcg
tacaggaaactcctggagggtgaagagaccagatttagcacattcgcaggaagcatcact
gggccgctgtatacacaccgacagccctccatcgccatatccagtaagattcagaaaacc
aaggtagaggctcccaagctaaaggtccaacacaaatttgttgaggagatcatagaggaa
accaaggtggaagatgagaaatcagaaatggaagaagccctgacggccattaccaaggaa
ttggccgtttccatgaaagaggaggtcaaggaagaggaggctgaagaaaaggaggagaaa
gaagaagctgaagaagaagttgtcgctgccaaaaagtctccagtgaaagctactgcacct
gaacttaaagaagaggaaggagaaaaggaggaggaagagggccaagaggaagaggaagag
gaagaggaggctgctaagtcagaccaagccgaggaaggaggatctgagaaggaagcttct
agtgaaaaagaggaaggtgagcaagaagaggaaggagaaacagaggctgagggggaagga
gaggaagccgccgccgaagctaaggaggaaaagaaaatggaggaaaaggctgaagaagtg
gctccaaaggaggagctggtggcagaagccaaggtggagaagccagagaaagccaagtcc
ccagtgaccaagtccccgacaacaaagtcccctacggcaaagtccccagaggcaaagtcc
ccaacagcaaaatccccgacggccaagtccccagtggcaaagtccccgacggcaaagtcc
ccatcggcaaagtccccaacagcaaagtccccagcggcaaaatcacccgtggaggaagtg
aaacccaaagcagaagctggagctgagaaaggagaacagaaggagaaggtggaggaagaa
aagaaagaagcaaaggaatctcccaaggaagagaaggcagagaaaaaggaggaaaaggca
aaggatgtgccagagaagaagaaggctgaatccccagtgaaggctgagtccccagtgaag
gaggaggtgcccgccaagccagtaaaggtgagccccgagaaggaagccaaagaggaggag
aagccccaggagaaagagaaggagaaagtggaagaggtgggagggaaggaggagggaggt
ttgaaggaattcaggaaggaagacatagccatcaatggggaggtggaagggaaggaggaa
gaacaggaaactaaggagaaaggcagtgggggagaagaggagaaaggagtcgtcaccaac
gggctagacgtgagcccagcagatgaaaagaagggcggtgataaaagtgaggagaaagtg
gtggtaaccaaaatggtagaaaaaatcaccagtgaggggggagatggtgctaccaagtat
atcaccaaatctgtaaccgtcactcaaaaggtcgaagagcatgaagagacctttgaggag
aaactagtgtctactaaaaaggtagagaaagtcacttcacacgccatagtaaaggaagtc
acccagagtgactaa
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