Bubalus bubalis (water buffalo): 102409549 Help Entry 102409549         CDS       T05912                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2 isoform X2   KO K24066   synaptopodin-2 Organism bbub  Bubalus bubalis (water buffalo) Pathway bbub04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bbub00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     102409549 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:bbub04990]     102409549 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:bbub04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    102409549 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PDZ Calsarcin PDZ_6 PDZ_2 PCM1_C Motif Other DBs NCBI-GeneID:  102409549 NCBI-ProteinID:  XP_006065151 LinkDB All DBs Position 7:complement(81601502..81801221) Genome browser AA seq 1259 aa AA seqDB search MGTGDFICISMTGGAPWGFRLQGGKEQQQPLQVAKIRSQSKASGSGLCEGDEVVSINGNP CADLTYPEVIKLMESITDSLQMLVKRPSNGISETSISETENKNQENVTHEGYVESTTLQI RPATKSQYREFYIVPVKSGAPLAEEQASGAGFSGSIKEETGLAPHTSDSESGRLPEEIIL SEKAEAGRPGTVVELQLSLSQERHKGRSAAVVALLGAEKSKSPDPEPNLLHDGTVHINSA PTTEKEDPPLRSSKTIQISSGQELRVIQGNEAADTGLPRVEVIFDCSDRQKTEGCRLQAA KGCVDSPVEGGQSEAPPSLVSFAVSSEGAEQGEDPCSERDHSRPHKHRARHARLRRSESL SEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELEREAEEE EEDGDKEDPCEVAFLGASESEVDEELLSDTEDNTQVANFDWDSGLVDIEKKLSRGDKMEM LPDTTGKGALMFAKRRERMDQITAQKEEERAAGVPSREPDAAQTDGLRTVTSYQRKEEES VRVQSSVSKSYIEVSHGLGHVPQQNGFTGVSETAEAQRMIPVNRTAKPFPGSGNQPATPF SPSRNVTSPIADFPAPPPYSAVTPPPETFSRAVSSPTAGPAPPPPWPQPAPWSQPAFYDS SERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGKKGP GAGADSGPEEDYLSLGAEACNFMQGSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVWSPG VAPAQPPAFPTSNPSHGTVVSSIKIAQPSYAPARPASALNLAGPFKGPQAAVASRNYTPK PAAPTPTVNTAHAGAVGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAARAHSP TPSLPAGWKYSSNVRAPPPVAYNPIHSPSYPPAAVKSQPSGLQASKTGKKKGKKPLNALD VMKHQPYQLNASLFTFQPPDGKDGLPAKPSVKASSVPAAKQALPPRPVNAGSPTNVQASS VYSVPAYTSPPSFFAEVTSPVSASPVPVAIPTSPKQESASTSYFVAPRPKFSAKKSGVTV QTGRSLSLPGRPVPPAISATSPWLYQPAYSYTSKPTDGLEEAKKRLTPWEAAAKSPLGLV DEAFRPRNIQESIVANVVSAARRKVLPGQSEEWNARLSYVPQTQKTTVGSFAKQEYNVAS LPNYSMPNSQYGSQAPHAYYRQPSRNDSEIMSMETRSDYCLSITNCNYNPHPRGWRRQT NT seq 3780 nt NT seq  +upstreamnt  +downstreamnt atgggcacgggggattttatctgcatttccatgaccggaggggcaccctgggggttccga ttgcaaggtggcaaggagcagcagcagcccttacaagtcgctaagatcagaagccagagc aaagcctccgggtctgggctctgtgagggggatgaagtggtttctatcaatggcaacccc tgtgcagacctcacctacccagaagtcatcaagctcatggagagcataacagattctctc caaatgctcgtcaaaagaccttccaatggaataagtgaaacttcgatctctgaaactgaa aacaaaaaccaggagaatgtcacccatgaagggtacgtggaaagtaccaccctacagatt cgaccagccacaaagagccagtacagagagttctatattgtccctgtcaagagtggagct cccctagctgaggagcaagcgagtggtgctggtttttctgggagcataaaagaagaaaca ggcctggcccctcacacgtctgactctgaaagtggacgcttaccagaggagattatctta agtgagaaggcagaagcggggcggccaggcactgtggttgagctgcaactgtccctgtca caagagagacacaagggcaggagtgctgctgtagtggctctcctgggagcagaaaaatct aagtctcctgacccagagcctaatttactacacgatgggactgtccacataaattctgcc cccactacagagaaagaggaccctcctctgaggtccagcaagacaatccagatctccagt ggccaggagctgagagtgatccagggaaatgaagctgcagacacggggctgccccgcgtg gaagtgatcttcgactgctctgacaggcagaagacggaagggtgcaggcttcaggcagca aaggggtgtgtggattctccagtggaaggagggcagtcagaagcacctccttctctggta tcctttgcagtctcatcagaaggcgcagagcagggagaagatccatgctcagaaagggat cacagcagacctcacaagcacagagcgcgccacgcacggctcaggaggagtgaaagctta tcagaaaagcaggtgaaagaagcaaaatctaaatgcaaaagcattgccctccttctgaca gatgcccccaaccccaactccaagggggtgttgatgtttaagaagcgtcgtaggagggcc aggaaatacacattagtcagctacgggactggggaacttgagcgagaggcagaggaggag gaggaagacggcgacaaagaggatccatgtgaagtagcatttctgggtgcaagcgaatcg gaggtggatgaagagctgttgtctgacactgaggacaacacacaagttgcaaactttgac tgggattctggtctagtggacattgaaaagaaactgagcagaggggacaagatggagatg ttgccagacaccacaggcaagggggccctcatgtttgccaagaggagggagagaatggat cagatcacagcccaaaaagaggaggagagggcggccggagtgccaagcagagaaccagat gctgcccagacagatggcctgagaaccgtgacgtcttaccaaaggaaggaagaagagtca gtgagagtgcagagctctgtgagcaaaagctacattgaggtgagccatggtcttggccat gtgccccaacagaatggcttcactggggtgtctgagacagcagaagctcagaggatgatc cctgtgaatagaacagccaagcccttcccggggtctgggaaccagccggcaacccccttc tctccaagccgaaacgtgacaagtcctatcgctgactttcctgcgcctccaccttactct gcagtcacacccccacctgaaaccttctccagagcagtgtcgagtccaacagctggccca gcaccgccccctccgtggccccagcctgccccatggtcccagccagccttttacgattca tctgaacgaatagcttccagggatgaaaggattgcggtgccagcaaaaagaacggggata ttgcaagaggccaaaaggagaagcacgacaaaacccatgttcacttttaaagagcccaaa gtcagccccaaccctgaactcttgtcacttcttcaaaattctgagggcaaaaagggccct ggagcgggagcagattccggacctgaagaagactacctcagtttaggagcagaggcttgt aacttcatgcaaggctcctctgcaaaacagaagaccccgcctcctgtcgctccaaagcct gctgtcaagtcatcatcctcccaaccagtcactccggtttctccagtctggtcgccagga gtggctccagcgcaacctcctgccttccccacatctaacccgtcacatggcaccgtggtc tcctccatcaaaatcgcgcagccttcttatgctcccgcccggcctgcaagtgctctgaac ctggctggtcctttcaaaggcccacaggcagcggtagccagccggaactatactcccaag ccagcagctcccacaccgacagtgaacactgctcatgctggtgcggtgggaccatccaat gagcttccaggaatgagtgggaaaggagcccagctctttgctaagaggcagtcaaggatg gagaagtacgtggtagattcggacaccgtgcaggcccacgctgcccgggctcattctccc accccgtctctcccggccggttggaagtactcctccaatgtccgagcgcctccgcctgtg gcctacaatcctatccactccccctcctacccaccggctgctgtcaagtctcagccatca ggcctacaggcctccaagacaggcaagaaaaagggcaagaaacccctcaatgctttggat gtcatgaagcaccaaccctatcagcttaatgcgtccttgtttactttccaacctccggat ggaaaggacggcctccccgcaaagccatcggtcaaggccagttcagtgccagctgcgaag caagctcttcctcctcggccagtgaacgctggctcgcccactaatgttcaggcctcctct gtgtactccgtgccagcctatacctctccgccctccttctttgctgaggtcacctcaccg gtcagcgcttccccagtgcccgtggccatccccacctctccaaagcaggaatcagcctca acatcttactttgtggcaccaaggccaaagttctcagcaaagaagagcggtgtcacagtt cagactggacgctctctttctcttcctggaagaccagtcccacctgccatctctgcaaca tctccttggttataccagcctgcttacagctacactagcaagccaacggatgggctcgag gaagcaaagaagagactgactccttgggaagcagcagccaagtctccccttggcttagtg gatgaggccttcagacccagaaacattcaggaatccattgtggcaaatgtggtctcagca gctcgtagaaaggtgcttccagggcagtctgaggaatggaatgcaagactgtcctatgtc cctcaaacccagaagaccactgtgggctcatttgcaaagcaagaatataatgttgcatcc ctacccaattatagtatgcccaactcccaatatggttcacaggcaccacatgcatattac aggcagccttccagaaacgattctgaaataatgtccatggagaccaggtctgattattgt ctctccataaccaactgcaactataacccacacccaaggggatggagacgtcaaacatga

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