Bubalus bubalis (water buffalo): 102409675
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Entry
102409675 CDS
T05912
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03008
Ribosome biogenesis in eukaryotes
bbub05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102409675 (DROSHA)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
102409675 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102409675 (DROSHA)
03009 Ribosome biogenesis [BR:
bbub03009
]
102409675 (DROSHA)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102409675 (DROSHA)
Enzymes [BR:
bbub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
102409675 (DROSHA)
Messenger RNA biogenesis [BR:
bbub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
102409675 (DROSHA)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
90S particles
RNase
102409675 (DROSHA)
Prokaryotic type
rRNA processing factors
102409675 (DROSHA)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
102409675 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
YcaO
Motif
Other DBs
NCBI-GeneID:
102409675
NCBI-ProteinID:
XP_025126218
LinkDB
All DBs
Position
19:41819838..41944320
Genome browser
AA seq
1337 aa
AA seq
DB search
MQGSACHRMSFHPGGPRCPRGRGGHGARPSAPAFRPQNLRLLHPQQPPVQYQYEPPSAPS
TTFANSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPPFPNHQMRPPFPVPPCFPPM
PPPLPCPNNPPVPGAPPGQGAFPFMMPPPSLPHPPPPPVVPQQVNYQYPPGYSHHSFPPP
NFSSFQNSPSSFPPSASNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDHSHGR
GERHRSLERRERGRSPDRRRQDSRYRSDHERGRTPSRHRSYERSRERERERHRHRDSRRS
PSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDIPGSGKEKNYTSIKEKEPEEALP
DKNEEEEEELLKPVWIRCTHSENYYSSDPMDQVGDSTVVGTSRLRDLYDKFEEELGSRQE
KAKAARPPWEPPKTKLDEDLESSSESECESDEDSTCSSSSDSEVFDVIAEIKRKKAHPDR
LHDELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEAIKPCRPMTNNAGRLFHYRIT
VSPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMP
ENFCVKGLELFSLFLFRDILELYDWNLKGPLFEDSPPCCPRFHFMPRFVRFLPDGGKEVL
SMHQILLYLLRCSKALVPEEEIANMLQWEELEWQKYAEECKGMIVTNPGAKPSSVRIDQL
DREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQTDKQK
LAQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHIRYHQCLM
HLDKLIGYTFQDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHM
RKKGINTLINIMSRLGQDDPTPSRINHNERLEFLGDAVVEFLTSVHLYYLFPSLEEGGLA
TYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGAVYLEGSL
EEAKQLFGRLLFNDPDLREVWLNYPLHPLQLQEPNTDRQLIETSPVLQKLTEFEDAIGVI
FTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLL
RSSLVNNRTQAKVAEELGMQEYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYV
HTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHART
YTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQKRFIERKYRQELKEMRW
EREHQEKEPDETEDIKK
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcagtgcatgtcacagaatgtcgttccacccaggaggacccaggtgtccccga
gggcgagggggacatggagccagaccctccgcaccagccttcaggccccaaaatctgaga
ctgcttcaccctcagcagcctcctgtgcaataccaatacgaacctcccagcgccccttcc
accaccttcgccaactctccggcccccaattttctgcctccaagaccagactttgtaccc
ttccctccgcccatgcctccttcagcgcaaggccccctacccccctgcccgatccggccc
ccgttccccaaccaccagatgaggccccccttccccgtgcccccctgtttccctcccatg
ccgcctccgctaccctgtcccaataaccccccagtccctggagcgcctccgggccaaggc
gccttccccttcatgatgccgccgccgtccttaccgcatccgccgccgcctcccgtcgtt
ccgcagcaggtcaattaccagtacccgccggggtactcgcaccacagtttcccacccccc
aacttcagtagcttccagaacagccccagttccttcccgcccagtgctagtaacagcagt
agccctcacttcaggcacctccctccgtacccgctccccaaggctcccagtgagaggcgg
tccccagaaaggctaaagcactacgacgaccacaggcaccgggaccacagtcacgggagg
ggcgaacggcatcggtccctggagcggcgggagcgaggccggagccccgaccggagaagg
caggacagccgctacaggtcggatcacgagcgggggcgcacgccctcccgccaccggagc
tacgagcggagcagagagcgggaacgggagagacacaggcaccgggacagccgaagatca
ccatctctggaaaggtcctacaaaaaagagtataagagatctggaagtcgctccccaagc
agggagaagaagagagctcgctgggaggaagaaaaagacagatggagtgacatcccgggt
tctggcaaagagaagaattatacctcaatcaaggaaaaggagccagaggaggcgctgcct
gacaaaaacgaggaggaggaagaagaactccttaagcctgtgtggattcgctgcacccac
tcagaaaactactactccagtgaccccatggatcaggtgggagattctactgtagttgga
acaagtaggctccgtgacttatatgacaaatttgaggaagagttggggagcaggcaagag
aaagccaaagctgctagacccccatgggagcctcccaagacgaagctagatgaagattta
gagagttccagtgaatccgaatgcgagtctgatgaggacagcacctgctctagcagctca
gactctgaagttttcgacgtcattgcagaaatcaaacgtaaaaaggcccatcctgaccga
cttcatgatgaactttggtacaacgacccaggccagatgaatgatggccctctctgcaaa
tgcagcgcaaaagcgagacgcacgggcatcaggcacagcatttatcccggagaagaggcc
atcaagccctgtcgtcctatgaccaacaatgctggcaggcttttccactatcgaattaca
gtctcacctcccacaaactttttaactgacaggccaactgttattgaatatgatgatcac
gagtacatctttgaaggattttctatgtttgcacacgcccccctgaccaatattccactg
tgcaaagtaattagattcaacatagactacacgattcatttcatagaagagatgatgcct
gagaatttttgtgtgaaaggacttgaactcttttcattattcctattcagagatattttg
gaattgtatgactggaatctcaaaggtcctttgtttgaagacagtcctccctgctgtcca
agatttcattttatgccacgttttgtaagatttcttccagatggagggaaagaagtactg
tctatgcaccagatcctcctctacttactacggtgtagcaaagcccttgttcccgaagag
gagattgccaatatgcttcagtgggaagaacttgagtggcagaaatacgcagaagaatgc
aaaggcatgatcgtcaccaaccctggagcgaaaccaagctctgtccgcatcgatcaactg
gatcgtgaacaattcaaccctgatgtgattacttttccgattatcgttcactttgggata
cgccctgcacagttgagttatgctggagacccacagtaccagaaactgtggaagagttat
gttaagcttcgccacctcctagcaaatagtccaaaagtcaaacagactgacaagcagaag
ctggcacagagggaggaagcactccagaaaatacgacagaagaataccatgaggcgagaa
gtaacagtggagctgagtagccaaggcttctggaaaactggcatccgttctgatgtctgt
cagcatgccatgatgctgccagttctgacccatcatattcgctaccaccagtgcctaatg
catctggacaagttgataggatatactttccaagatcgttgtctgttacagctggccatg
acccacccaagtcatcacttaaattttggaatgaatcctgatcatgccaggaattctctg
tctaactgtgggattcggcagcccaaatatggagatagaaaagttcatcacatgcacatg
cggaaaaaaggaattaacaccttaataaatattatgtcacgccttggccaagatgaccca
actccctcaaggattaatcacaacgaacggttggagttcctgggtgatgctgtcgttgaa
tttctgaccagtgtccatttgtactatctgtttcccagtctggaagaggggggattagca
acctatcggactgccatcgttcagaaccagcaccttgccatgctagcaaagaaacttgaa
ctggatcggtttatgctttatgctcatggacctgacctttgtagagaatcagaccttcgg
catgcaatggctaattgttttgaagcattaataggagctgtttacttggagggaagcctg
gaggaagccaagcagttatttggacgcttactctttaatgatccggacctgcgcgaagtc
tggctcaattatcctctccacccactccagcttcaagagccaaatactgatcgacaactt
attgagacttctccagttctacagaaacttactgaatttgaagatgcaattggagtaatt
tttacacatgttcgacttttggcaagagcattcacattgagaactgtgggatttaaccat
ctgaccctaggccacaatcagaggatggaattccttggtgactccataatgcagctggta
gcaacggagtacttattcattcattttccagatcatcacgaaggacacttaactctgttg
cgaagctctttggtgaataacagaactcaggccaaggtggcggaggaactgggcatgcag
gaatacgccatcaccaacgacaagaccaaaagacctgtcgccctgagaaccaagaccttg
gctgaccttttggaatcatttattgcagcactatacattgataaagacttggaatacgtt
catactttcatgaatgtttgtttctttccacgattaaaagaattcattttgaatcaggat
tggaacgaccccaagtcccagcttcagcagtgctgcctgactcttaggacagaaggaaaa
gaaccagacattccgctatacaagactctgcagacggtggggccatcccatgcaaggacc
tacactgtggctgtctacttcaagggagaaagaattggctgtgggaaaggaccaagtatt
cagcaagcagaaatgggagcagcaatggatgcacttgaaaaatataactttccccagatg
gcccatcagaagcggttcattgaacggaaatacagacaagagttaaaagaaatgaggtgg
gaaagagagcatcaagagaaagagccagatgagaccgaagacataaagaaataa
DBGET
integrated database retrieval system
