Bubalus bubalis (water buffalo): 102409687
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Entry
102409687 CDS
T05912
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X3
KO
K23625
ataxin 2/2L
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub05014
Amyotrophic lateral sclerosis
bbub05017
Spinocerebellar ataxia
bbub05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102409687 (ATXN2L)
05017 Spinocerebellar ataxia
102409687 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
102409687 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102409687 (ATXN2L)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102409687 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
102409687
NCBI-ProteinID:
XP_006070585
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All DBs
Position
24:16298912..16311019
Genome browser
AA seq
1065 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPPGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPPPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYN
NSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKVSEPAGGPRREDI
VDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSD
DYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQL
AREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLAAREGKYIPLPQRVREG
PRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGA
KTLSSPSSRPSGEASVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPMGSAVPTSSASIP
VTSAVGDPGVGSVSPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGLQNEQKR
FQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLASEPLGSPVSSK
AESVSDKEDKPPLPAAGGAEGPEQPPAPCPSQTGSPPVGLIKGDDKDEGPVAEQVKKSTL
NPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHM
GPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPL
VAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSS
TPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPPSQHAAPSPVQHQA
GQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGF
TNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSAST
PSPYPYIGHPQGEQPGQAPGFPGGADDRIPPLPPPGELKIVLAAT
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcgccctcccgggggcaccagcccgcccaacggcggtctcccgggg
cccctggcctccacctcggctcccccaggacctcctgcggccgcctccccctgcctgggg
cctgcagccgctgccgggagcgggctccgccggggagccgagggtatcttggcgcctcaa
ccgccgccaccgcagcagcaacatcaggagaggccaggggcagcggccatcggcagcgcc
aggggacaaagcacaggaaagggacctccacagtcaccggtgtttgagggtgtctacaac
aattccagaatgctgcatttccttaccgctgttgtgggttccacttgtgatgtaaaggtg
aagaacggtaccacctatgagggtatcttcaagacgctgagctcaaagtttgaactggca
gtggacgctgtgcaccggaaggtatcggagccagcgggtggccctcgtcgggaagacata
gtggacaccatggtgtttaagccaagtgatgtcatgcttgtccacttccgaaatgtcgac
ttcaattatgctactaaagataagttcactgactcggccattgccatgaactcgaaagtg
aatggggagcacaaagagaaggtgcttcagcgctgggagggcggtgatagcaacagtgat
gactacgacctggagtctgacatgtctaatggatgggaccccaacgaaatgttcaagttc
aatgaggagaactatggtgtaaagaccacctatgacagcagtctttcttcttacacggtg
cccttagagaaggacaattcagaagaattccgtcagcgggagctgcgtgctgcccagttg
gcccgagagattgaatcgagcccccagtaccgcctgcggatcgccatggagaatgatgat
gggcgcacggaggaggagaagcacagtgcagttcagcgacagggctcagggcgtgagagc
cccagcttggcagccagggagggaaagtatatccctctgccccagcgagttcgggaaggt
ccccggggaggcgttcgctgcagtagttctcggggtggccggcctggccttagctctttg
ccgcctcgtggccctcaccatcttgacaatagcagccctggcccaggttctgaggcacgt
ggtatcaatggaggcccttcccgcatgtcccctaaggcccagcgacctctgagaggtgcc
aagactctgtcttcccccagcagcaggccttctggagaagcctctgttccacctcctcct
gcagtgggccggatgtacccgccgcgctctcccaaatcagctgcccccgccccaatctca
gcttcctgtcctgagcctcccatgggctcagcagtaccaacctcttcagcttccatccca
gtgacatcagcagttggggatcctggagtaggctccgtttccccagcttctccaaagatc
tcactggcccccacagatgtaaaagaactcccggccaaggaacctggaaggacgctggag
tcccaggagttgtcccggattgcagggaaagtccctggccttcagaatgaacagaagcgt
tttcagctggaagaactgagaaagtttggggcccagtttaagcttcagcccagtagctcc
cccgagaccagcttggatccttttcctccacggatcctgaaagaggaggccaaagggaag
gagaaggaggtggatggtcttttggcttcagagcccctggggtctcctgtttcctcgaag
gccgaatcagtatcggacaaggaggacaaaccgcccctgccagcagcagggggtgccgag
gggccggaacagcctccggcaccttgcccaagccaaactggcagccccccagtgggcctc
atcaagggagatgacaaggatgagggcccagttgccgaacaagtgaagaagtcaacattg
aaccccaatgccaaggagttcaatcccactaagcccctgctctctgtgaataaatccacc
agtactccgacttctcctgggccccggactcattcaactccctccatcccggtgctgaca
gcaggccagagtgggctctatagcccccagtacatttcctacatacctcagatccacatg
ggaccagctgttcaggcaccacagatgtatccgtatcctgtgtccaactcagtgcctgga
cagcagggcaagtaccggggcgccaaaggctccctgcccccccagcgctcggaccaacac
cagccagcctccgcccctcccatgatgcaggctgccgccgccgctgccggtccacctctg
gtggccgccaccccttactcttcctacatcccctacaacccacagcagttcccaggccag
cctgccatgatgcagcccatggcccactacccctcgcagccggtgtttgcccccatgctt
caaagcaacccacgcatgctgacatcggggagccatccccaggccatcgtgtcatcctcc
acccctcagtacccttctgcagagcagcccaccccccaggccctttatgccaccgttcac
cagtcctatccacaccatgccacgcagctccatgcccaccagccgcagccggccaccacg
cctactgggagccagccgccgtcccagcatgcggcccccagtcctgtccagcaccaggcg
gggcaggccccacacctgggcagtggacagccgcagcagaacctgtaccacccaggggcc
ctgacaggcacgccgccttctctgccaccgggaccttctgcccagtcccctcagagcagc
ttcccccaaccagccgctgtatatgccatccatgcccaccagcagctgccccacggcttc
accaacatggcccatgttacccaggcccatgtccaaactggaatcacagcagccccgccc
cctcaccctggggctccccacccgccccaggtgatgctgctgcacccaccccagagccat
gggggccccccccaaggcgcggtgccccagagtggggtgcctgcactctcagcttccaca
ccctcaccctacccctacatcggacacccccaaggtgagcagcctggccaggcgcctgga
tttccaggaggagccgatgacaggattcctccccttccaccccccggggaactgaagatt
gtcctggccgcgacctga
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