Bubalus bubalis (water buffalo): 102409733
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Entry
102409733 CDS
T05912
Symbol
NUP160
Name
(RefSeq) nuclear pore complex protein Nup160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102409733 (NUP160)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102409733 (NUP160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102409733 (NUP160)
03036 Chromosome and associated proteins [BR:
bbub03036
]
102409733 (NUP160)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102409733 (NUP160)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102409733 (NUP160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Nup160_C
Beta-prop_Nup120_160
TPR_NUP160_120_M
NUP160_helical
HEAT_Nup120
TTC22_C
Motif
Other DBs
NCBI-GeneID:
102409733
NCBI-ProteinID:
XP_044785049
LinkDB
All DBs
Position
16:7268995..7313318
Genome browser
AA seq
1414 aa
AA seq
DB search
MAAAGAVERSFVEVVGAERERPRHFREFTVCGIGTANAAAGAVKYGESAGGFYYVESGKL
FSVTRNRFIHWKTSGDTLELVEESLDINLLNNAVRLKFQNCVLLPGGVHVSETQNHVIIL
ILTNQTVHRLLLPHPSRMYRSELAIESQMQSIFTDIGKVDFRDPCNYQPIPSVPGLSPGS
ATSAAWLSNDGEALFALPSASGGIFVLKLPPYDVPGVVSVVELKQSSVMQRLLIGWMPTA
IRGDQGPSDRPLSLAVHCVEHNAFIFALCQDHKLRMWSYKDQMCLMVADMLEFVPVNKDL
RLTAGTGHKLRLAYSPSMGLYLGVYLHAPKRGQFCVFQLVSAENNRYSLDHISSLFTSQE
TLIDFALTSTDIWALWHDAENQTAVKYINFEHNVAGQWSPVFMQPLPEEEIVIRDDQDPR
EMYLQSLFTPGRFINAALCKALQIFCRGTERNLDLSWTELKKEVTLAVESELQGSVTEYE
FSQEEFRSLQQEFWCKFYACCLQYQEALSHPLALHLNPHTNMVCLLKKGYLSFLVPSSLV
DHLYLLPDDNLLTEDETTISDDVDVARDVMCLIKCLRLIGESVTMDMSVMMEMSCYSLQS
PEKAAEQILEDLITIDVDNVMEDICSKLQEIRNPIHAIGLLIREMDYETEVEMEKGFSPA
QPLNIRMNLSQLYGSSTSGHIVCRSVCKIASTRFLICRDLLILQQLLMRLGDAVILGAGQ
LFQAQQDLLHRTAPLLLSYYLIKWGSQCLATDVPVDTLESNLQHLSVLELTDSGALTANK
FVSSPQTIVELFFQEVARKHIISHLFSQPKAPLSQTGLNWPEMITAVTSYLLQLLWPSNP
GCLFLECLMGNCQYVQLQDYIQLLHPWCQVNVGSCRFMLGRCYLVTGEGQKALECFCQAA
SEVGKEEFLDRLIRSEDGEIVSTPRLQYYDKVLRLLDVVGLPELVIQLATSAITEAGDDW
KSQATLRTCIFKHHLDLGHNSQAYEALTQIPDSSRQLDCLRQLVVVLCERSQLQDLVEFP
YVNLHNEVVGIIESRARAVDLMTHNYYELLYAFHIYRHNYRKAGTVMFEYGMRLGREVRT
IRGLEKQGNCYLAAINCLRLIRPEYAWIVQPASGAVYDRPGASPKRNHDGECTAAPSELG
NSGRLSLNANRQIEILELEDLEKECSLARIRLTLVQHDPSAAAVAGSSSAEEMVTLLVQA
GLFDTAISLCQTFKLPLTPVFEGLAFKCIKLQFGGEAAQAEAWAWLAANQLSSVITTKES
SATDEAWRLLSAYLERYKVQNNLYHHCVINKLLSHGVPLPNWLINSYKKVDAAELLRLYL
NYDLLEEAVELVSEYVDAVLGKGHQYFGIEFPLSATAPMVWLPYSSIDQLLQALGENTAN
SHNIALSQKILDKLEDYQEKVDKATRDLLYRRNL
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgggagccgtggaacggagcttcgtggaggtcgtcggcgctgagcgcgaa
aggccgaggcactttcgggagttcactgtttgcggcattggaactgcaaatgcagcggcc
ggagccgtaaaatatggtgagagcgcgggaggcttctactatgtggaaagtggcaagctg
ttctccgtcaccaggaacagattcattcattggaaaacctctggagatacattggagctg
gtggaagagtcattggacataaatctgttgaataatgcagttcgcctcaaattccaaaac
tgcgtccttctacccggaggagttcatgtctctgagactcagaaccatgtgataatcttg
atattaaccaatcagacagtgcataggttgcttttaccacacccttcccggatgtatagg
agtgagctggcaatcgaaagtcagatgcagtcaatattcactgacattggaaaagttgat
tttagggatccttgcaactatcagccgatcccatcagtgcctggcctctcccctggttct
gccacctcagcagcctggctgagcaacgatggggaggctctgtttgctctgccatctgcc
tccgggggaatctttgttcttaaactacctccttatgacgtacctggggtggtgtcagtc
gtggagctgaaacaaagctcagtgatgcagcgcctgcttataggctggatgcccacagct
atcagaggtgaccaggggccttcagatcgtcccctgagccttgctgtgcattgtgtcgag
cacaatgccttcatctttgctctgtgtcaagatcataaactacgaatgtggtcttacaag
gaccaaatgtgcctgatggtggctgacatgctggagtttgtccccgtaaataaagatctc
cggctcactgctgggactggacacaaattgcgacttgcttattccccttccatgggactc
tacctgggagtatacctgcatgcaccaaagcgaggacagttctgcgttttccagttggtg
agcgctgagaataaccgctatagcctagatcacatctcctcactgttcacttctcaggag
acactgattgactttgccttaacctccacggatatctgggccctgtggcacgacgctgag
aaccagacagctgtgaaatacatcaactttgaacataacgttgcaggtcagtggagtcca
gtttttatgcagcctctgccagaggaagaaatcgtcatcagagatgatcaagaccccaga
gagatgtatttgcagagtctttttacaccagggcgattcattaatgcagctttatgtaaa
gctttacagattttctgtcgaggaactgagaggaatttagatctttcctggacggaacta
aagaaagaagttactttagctgttgaaagtgagctccaaggaagtgtaacagagtatgaa
ttctcccaggaagagttccgaagtttacagcaggaattctggtgcaagttctatgcctgc
tgtcttcagtatcaggaagccctttcccatcctcttgccctgcatttgaacccacacaca
aacatggtgtgcctgttgaagaaagggtacctgtctttccttgtgccttcttccttagtg
gatcatttgtatctcctccctgatgataatcttttgacagaggatgagacaaccatatct
gatgacgtggatgttgctcgggatgtcatgtgtcttataaaatgcctccggctgattgga
gagtcagtaactatggatatgtcagtaatgatggaaatgagctgttacagcctacagtct
ccagaaaaggctgcagaacagattctggaagatttgatcactattgatgtagacaatgtg
atggaggatatttgtagtaaactgcaggagattaggaacccaatccatgccatcggactt
ctgatacgggaaatggattatgaaacagaagtagaaatggaaaagggattcagtccagct
cagcctttgaatattcgaatgaatctttctcagctctacggtagtagcacgtcagggcat
attgtttgccgaagtgtgtgtaaaattgccagcacgcgcttcctcatctgccgagacctt
ttgatcttacagcagctactaatgaggctaggagatgccgtaatcttgggagctggccag
ctctttcaagcccagcaagacctactgcatcgaacagctcccctactcttatcttattac
ctcataaagtggggaagtcaatgcttggcaactgatgttccagttgatacattggagtct
aatcttcaacatttatcagtactggaactgactgactctggtgctttaacggcaaataag
tttgtatctagccctcagacaattgtggaattattcttccaagaagttgcaagaaaacac
attatatctcatctgttctctcaaccaaaggcacctctaagccaaactggattgaactgg
ccagagatgatcactgcagttaccagttatttattgcagctcttgtggcctagcaatcct
ggttgtctctttctagaatgtttgatgggaaattgtcagtatgtacaattgcaggattat
attcagttgctgcatccctggtgtcaagtcaacgttggttcctgcagatttatgctggga
cggtgttacctggttacgggagagggacagaaggctctggagtgtttctgccaggcagca
tccgaagtgggcaaagaggaattcttagatcgcttgatccgttccgaggatggagagatt
gtgtccaccccccggctgcagtattatgataaggttttgcgtctgctggatgtcgtaggt
ttgcctgaactggttattcagttggccacatcagcaataactgaagcaggtgatgactgg
aaaagtcaggccactttaaggacatgcattttcaaacatcatttggatttaggtcacaat
agccaagcctatgaagcattaacccaaattcctgattccagcaggcagttggattgtctg
cggcagctggtggtagttctttgtgaacgttcccaacttcaggatcttgtggagtttccc
tatgtgaatctgcataatgaggtggtgggaataattgaatcccgggcaagagctgtggac
cttatgactcacaattactatgagcttctgtatgcctttcacatctatcgtcacaattac
cggaaggctggcacagtgatgtttgagtatggaatgcgtcttggcagagaggttcgaact
atccggggacttgagaagcaaggcaactgttatctggctgctattaattgcttacgactt
attcgcccagaatatgcgtggattgttcagccagcatctggtgcagtgtatgatcgccct
ggagcatcccctaagaggaatcatgatggagaatgcacagctgccccaagtgagttgggg
aactcaggccgactttcgctgaatgcgaatagacagattgaaatcctggaactggaagat
ctggagaaggagtgctccttggcccgcattcgcctcaccctggttcagcatgacccctcg
gcagccgccgttgcaggaagttcatccgcagaggagatggtcactctcttggttcaggct
ggcctttttgacactgccatatcactgtgtcagactttcaagcttcccttaacgccagtc
tttgaaggacttgctttcaaatgcatcaaattgcagtttggaggagaggcagcgcaagca
gaagcctgggcctggctagcagccaaccagctctcgtcagtcatcaccactaaggagtct
agtgctacagatgaagcgtggcggctattatcagcttacctggaaaggtacaaagtccaa
aacaacttatatcaccactgtgtaatcaacaagctcttatctcatggagttcctctgcct
aactggctaataaacagttacaagaaagttgatgcagctgagttgctccgtctgtactta
aactatgaccttttagaagaagctgtggagttggtttcagaatatgtggacgctgtactg
ggaaaaggacatcagtactttggaattgagttcccactgtccgccacggctccaatggtg
tggctcccatactcctccattgatcagcttctccaggctctgggagagaacactgccaac
agtcacaacatcgcgctgtcccagaaaatacttgacaaattagaggactaccaagaaaaa
gttgataaggcaacacgggatttgttgtatcgtcggaacttgtga
DBGET
integrated database retrieval system
