Bubalus bubalis (water buffalo): 102409757
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Entry
102409757 CDS
T05912
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X2
KO
K06757
neurofascin
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04514
Cell adhesion molecule (CAM) interaction
bbub04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102409757 (NFASC)
04517 IgSF CAM signaling
102409757 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102409757 (NFASC)
Cell adhesion molecules [BR:
bbub04515
]
Immunoglobulin superfamily
L1 family
102409757 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Ig_PDGFR_d4
Fn3_PBP1
BiPBP_C
Fn3_Dep-1_3rd
DUF4998
Motif
Other DBs
NCBI-GeneID:
102409757
NCBI-ProteinID:
XP_025133543
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All DBs
Position
5:complement(78450678..78650640)
Genome browser
AA seq
1475 aa
AA seq
DB search
MRRREASGAAGDDGQAAARAADSADCTRGRSPSPCRLTDFCAVWDAGVLLVSAAGKGAPS
GVTGRRLNESETLNSVREAQFQQLEAARPRGPGRGARGLVLRMAGQPPPWAYTAVLLCAL
SLGGAIEIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNS
KFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKS
PLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPISQDKRVSQGHNGDLYF
SNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNHPYNDSSLRNHPDMYSARGVAER
TPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALR
ITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANG
NPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAF
VSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYE
NGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQIAKRGTTVQLE
CRVKHDPSLKLTVSWLKDDEPLYISNRMKKEEDSLTIFGVAERDQGSYTCVASTELDQDL
AKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYV
VQFEEDQFQPGVWHDHSKFPGSVNSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRT
SGAPPESNPSDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVTVW
GSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTIIGYSGEDYPRAAPTDVKIRVLNSTAI
SLQWNRVYSDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQAGFPGDRLRGVVSRLFPYS
NYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGIL
IGYTLKYVAFNGTKVGKQIVENFSPNQTKFMVQRADPVSRYRFSLSARTQVGSGEAVTEE
SPAPPNEATPTAAPPTSPPTTVGAPGTASSTDATAAAAATEATTVPTVPPTTTATTEATT
VPTVPPVAPTTTATTEATASTATTTTTESPATTSRTEIQESAPDEQSIWNVTVLPNSKWA
NISWKHNFGPGTDFVVEYTDSNHTKKTVPVKAQAQPVQLTDLYPGMTYTLRVYSRDNEAI
SSAAVTFMTSAAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKK
DVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNED
GSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcgggaggcgagcggcgctgcgggggacgacgggcaagcggcggcgcgggcg
gcggacagcgccgactgcacccggggccggagccccagcccttgcaggttgactgacttc
tgtgcagtttgggacgctggagttctccttgtctctgcagccgggaagggagccccctct
ggcgttacgggaaggaggctgaatgagtcagagacgctgaactccgtccgggaggctcag
ttccaacaactggaggcagcgagacctcgcgggccggggcgcggggcgcgaggcctggtg
ctcaggatggccgggcagccgccgccctgggcctacacagccgtcctcctctgcgcgctc
agcctcggcggggccatcgagatccccatggacccaagcattcagaatgagctgtcccag
cccccgaccatcaccaagcagtccgtgaaggaccacattgtagatccccgtgacaacatc
ttgattgagtgtgaagccaaggggaaccctgcccccagcttccactggacgcgcaatagc
aagttctttaacatcgccaaggacccccgggtgtcgatgaggaggcggtccgggacgctg
gtgatcgacttccgcagtggcgggcggccagaggagtacgagggggagtaccagtgcttt
gcccgcaacaaatttggcacggccctgtccaatcggattcgcctgcaggtgtccaaatcc
cccctgtggcccaaggaaaacctcgaccctgtcgtggttcaagaaggtgcccccttgacg
ctccagtgcaaccccccacctgggcttccatccccggtcatcttctggatgagcagctcc
atggagcccatcagccaagacaagcgtgtctcgcagggccataacggggacctgtatttc
tctaatgtgatgctgcaggacatgcagacagactacagctgcaatgcccgcttccacttc
acccacaccatccagcagaagaacccattcaccctcaaagtcctgaccaaccacccctat
aatgactcgtccttaagaaaccaccctgacatgtacagtgcccgaggagttgcagagaga
acacccagcttcatgtatccccagggcactgcgagcagtcagatggtgctgcgtggcatg
gacctcctactggagtgcatcgcttccggggtccccacaccagacattgcatggtacaag
aaaggtggggacctgccatctgacaaggccaagtttgagaacttcaacaaggccctgcgc
atcaccaacgtgtctgaggaagactctggggagtatttctgcctggcctccaacaagatg
ggcagtatccggcacacgatctcggtgagagtgaaggctgctccctactggctggatgaa
cccaagaacctcatcctggctcctggcgaggatgggagactggtgtgtcgagccaatggg
aaccccaagcccacggtccagtggatggtgaacggggaacctttgcaatcggcaccgccc
aaccccaaccgtgaggtggccggggacaccatcatcttccgtgacacgcagatcagcagc
cgggccgtgtaccagtgcaacacctccaacgagcacggctacctgctggccaacgccttc
gtcagcgtgctggacgtgccgcctcggatgctgtcgccccggaaccagctcatcagggtg
atcctgtacaaccggacccggctggactgcccgttctttgggtctcccatccccacgctc
cgatggtttaagaatggacaaggaagcaacctggatggtggcaactaccacgtctatgag
aacggcagtctggagatcaagatgatccggaaagaggaccagggcatctacacctgtgtt
gccaccaacatcctgggcaaagcagagaaccaggtccgcctcgaggtcaaagaccccacg
aggatctaccggatgcctgaggaccagatcgccaagaggggcaccacggtgcagctggag
tgccgcgtgaagcacgacccctccctgaagctcacggtctcctggctgaaggacgacgag
ccgctctacatcagcaacagaatgaagaaggaggaggattccctgaccatcttcggcgtg
gccgagcgggaccagggcagctacacgtgcgttgccagcactgagctggaccaagacctg
gccaaagcctacctgaccgtactagctgatcaggccactccaactaaccgtttggctgcc
cttcccaaaggacgaccggaccgaccccgggacctggagctcaccgacctggctgagaga
agcgtgaggctgacctggatcccaggggacgacaacaacagccccatcacagactacgtc
gtccagtttgaagaagaccagttccagccaggggtctggcacgaccattccaagttcccg
ggcagtgtcaactcagctgtgctccggctgtcaccctacgtcaactaccagttccgggtc
atcgccatcaatgaggtgggcagcagccaccccagcctcccatctgagcgctaccgaacc
agcggagcaccccccgagtccaacccctctgatgtgaagggagaggggaccaggaagaac
aacatggagatcacgtggacgcccatgaatgccacctccgccttcggccccaacctgcgc
tacatcgtcaagtggcggcggagagagacccgcgagacctggaacaacgtcaccgtgtgg
ggctcccgctacgtggtagggcagacccccgtctatgtgccctacgagatccgagtccag
gctgaaaatgactttgggaagggccctgagccggacaccatcatcggttactctggagaa
gattatcccagggctgcacccacagatgttaaaatccgagtcctgaacagcaccgccatc
agccttcagtggaaccgcgtctactccgacacggtccagggccagctcagagaatatcga
gcctactactggagggagagcagcttgctgaagaacctgtgggtgtctcagaagaggcag
caagctggcttccccggcgaccgcctgcgtggtgtggtgtcccgcctcttcccctacagt
aactacaagctggagatggttgtggtcaatgggcgaggcgatgggcctcgcagtgaaacc
aaggagttcaccaccccggaaggagtacccagtgcccccaggcgtttccgagtccggcag
cccaacctggagacaatcaacctggaatgggatcatccagaacaccccaatgggatcctg
attggatatactctcaaatacgtggcctttaatggaaccaaagtaggaaagcagatagtg
gaaaacttctctcccaatcagaccaagttcatggtgcaaagagcagaccccgtgtcgcgc
taccgcttttccctcagtgccaggacgcaggtgggctcaggggaagcagtcacggaggag
tcgccagcacccccgaatgaagccacgccaaccgcagcgcctcccacgtcgcccccgacc
acggtgggcgcgcccggcacggcgagcagtaccgatgccactgccgccgccgccgccacc
gaagccacaacagtccccaccgtcccacctaccaccaccgccaccaccgaagccacaaca
gtccccaccgtcccacctgtcgcacctaccaccaccgccaccaccgaagccacagcctcc
accgccaccaccaccaccacggagagtcccgccaccacctccaggactgagatccaagaa
tccgcccccgacgagcagtccatctggaacgtcactgtgctccccaacagtaaatgggcc
aacatcagctggaagcacaatttcgggcccggaactgactttgtggttgagtacaccgac
agcaatcatacgaaaaaaactgtccctgttaaggcgcaggcccagcccgtacagctgaca
gacctctatcccgggatgacatacacgttgcgcgtttattcccgggacaacgaggccatc
agcagcgccgccgtcacctttatgaccagtgcagcctacaccaacaaccaggcggacatt
gccacccagggctggttcatcgggctcatgtgcgccatcgccctgctggtgctgatcctg
ctcatcgtctgtttcatcaagaggagtcgcggcggcaagtaccccgtgcgagaaaagaag
gatgtgccccttggccctgaagaccccaaagaagaggatggctcctttgattacagtgac
gaggacaacaagcccctgcagggcagccagacgtccctggacggcaccatcaagcagcag
gagagcgacgacagcctggtggactatggcgagggcggcgagggccagttcaacgaggac
ggctccttcatcggccagtacacggtcaagaaggacaaggaggagacggagggcaacgag
agctcggaggccacgtcaccagtcaacgccatctattctctggcctag
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integrated database retrieval system