Bubalus bubalis (water buffalo): 102409870
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Entry
102409870 CDS
T05912
Symbol
RP1L1
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bbub03037
]
102409870 (RP1L1)
04812 Cytoskeleton proteins [BR:
bbub04812
]
102409870 (RP1L1)
Cilium and associated proteins [BR:
bbub03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102409870 (RP1L1)
Cytoskeleton proteins [BR:
bbub04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
102409870 (RP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
102409870
NCBI-ProteinID:
XP_045020650
LinkDB
All DBs
Position
3:71271781..71317784
Genome browser
AA seq
2150 aa
AA seq
DB search
MNSTPRDALAPSHRECLLPSVARTPSVTQVTPAKKITFLKRGDPRFAGVRMAVHQRAFRS
FGALMDELSQRVPLSFGVRSVTTPRGLHGLSTLEQLQDGGCYLCSDKKPPRTPGGLGQPR
ERNPSAQHLREFEAPGTASTCKGLKASRRITLVKNGDPRLQQTVVLSHRNTRNLTAFLSK
ASDLLCFPVKHVYTTSGKRVDSLKALLRSPSVLVCAGLEPFRPLVMEDIRRKGSEPSSGQ
TSRNKSGSWGPKAKQSVIHARSRLENRPRQFSLMSERSGHSDPSVCPHRACMCPAPDRHP
LNTPAQLSPLVTGEDIEKNVSMNEDGSLSVEMKVRFHLLGEDPLLWSRRLGRASTHTVTS
GEGPDAGEVDLLGCVWKGHSGDPSEPGAQGLGPCEAGGVGAFDQGQRQQGSRYEIWMNPL
YISQGEWSACRWRSGLTQNSHSRAPRSQRVASRKRGSKDRASPASSDTPPGGSELNSSCC
SGSLEDPVASCGPHLASGAGEGKGKGAALGCRDHDGCLKPRTRGLTDALPDSSASARSHE
ECSKRDKLSQGRPSKTPHGATQQGVPGSPTVSPSSIVNKDPQAEEFGQGAGHPQAINRSG
VRPPSTRGPAASGDDAGGYTPPSACASALGRSRKQESRASTLCSAGSSVPSQRAQRACPR
QHHSPKDIHCPLDSSVSRPMPGLSSRDRAHPHGPSPSLSESPQGTWNQASWDPGPPFSVS
LYSQDTRRLSSIPITPGSNSDCVSNFYLPDSPSAETEGGPEFRPCSVALTPSNTSGPFSA
PADGLGEKTGDDRFQPSWPLVQPAGWPEGGRLGAQWGSCCSHLGTSLARGASCGTIQTIP
APQPQGSQGPSSKACWVCSRYCPTPPRTRPLGKRHPSGSRSEGDRSADGKPSGEQVGEEK
LDAWHPRPPGFQGAASGRAVRAVRRGSPRSGPQLRRMVQGKLSGRGGGLEEPEEGGSELL
GALPRASPEAVVREWLSNIPEEPIKHELEDKGEDVAGHGLEGPQEDPVDKHSPDSLERSV
WAGQLPQEQAASEEAEPDKAFPVASSASPKSGEGLPCRGVSETPTEAGTGKGVAVDSGRG
QRVLPSRVSTSLQIMKALMGSRPGRPSSLPEVSHSAGRRLSHSAQALITCLARLHFFDDD
DLGSPTSKVRFTDSPRYQELLSTFQALWPGSGFRNTELELDLRELGWRQALPALGPHVAT
EDFRPTSSSGVDVGSGSGGSGEGSGPCTVDCSLVSEKMELPLSISCQGPDSRTLGDPEVL
GNQQLSSYEAEGAASEDGAEKNGREQTLGGDPDQGDKDTMQEERVQLEEIKEEKERAELQ
VEGVRGFPEEEGIMERGLSGVGSQDGAGVWENKSLHEEEPGDPTAVAMQSSWERRGSPPE
PPRSLSERYLDASGSQSGPKAEPPLEKLLGAAETGCGQTLDKITQGAGERGTCKGHRGSL
ISDPVWVSKLLKKMEKAFMDHLATATAELCTRWGLQGDHLLDQMVAELQRDVGQRLQDSV
EKELLKVQSWAGGTGTGLPREALHWEASLQTEQRRRRLQALRNLSPFSEQTRGRGPPSFS
LEDLPIFRGALGTQLGVEAKGEEFCPCEACVRKKMVPASPVDAVGSASAPIRKAFDLQHI
LQKKKGGCADGETAEVAPAVEREVEPLHSDPSRTSTVRGADGDPELGSGQGPRAEEGDQT
FGRDEDPWGTEEEGGAQEKERKTEPCVGSDPWEGLGRGEQGMGGEEGDLEAGCRAEDTGE
AHGLGGGGLGPCRQDAGAETTEALEAARQERSEAGGGHGGDEEGGLQVGLGCGQSREASG
DRSPTPGADPPQQRSGPGSGLSSFSTSSLGSCSLLSQKGSEDEPWDRCMRSTEDQAMDIP
DPERKVTGMYPETNASEQEGDPSGTRTPEQGTEEGLSPEQSKEEGLAPEQEGGEGAAPEQ
EAEEASYTPQRLYRKAWLLLRPRLKPMDRTQVSRWRLGHFFQSTAHLPRVDPTAFPFTSV
TVTDIITLHADLTETLTKKPWMAMVGFRLPKMPTGYTLTRRLSSSDTPASSSVIPKCFAP
KPFLGPWVSAPQQEQRKMPPEDGSRYCLMNFMWLSIHCVDVSFCSIPADDVSTFGTIRAH
TYSPRPPFQEASLKPSESQESPQNAAEAAILESTQEGPHVLVVSLKPSQG
NT seq
6453 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcactccgagggacgccctggcccccagccaccgcgagtgcctcctgccttct
gtggcccggaccccctctgtcacccaggtcacgccggccaagaagataaccttcctcaag
cgaggggatccccggtttgctggggtccgcatggctgttcaccagcgcgccttcaggagc
tttggggccctgatggacgagctctctcagcgggtaccgctctcctttggggtgcgctcg
gtcaccacaccccggggcctgcatggcctcagcaccctggagcagctgcaggatggtggc
tgctatctctgctccgataagaagccccccaggactcccggcgggctgggccagccccgg
gagagaaacccttccgctcagcatttgagggaattcgaggcaccgggaacagcctctacc
tgcaaaggtctcaaagcctcgaggaggatcacgctggttaagaacggggaccctcggctc
cagcagacagtggtgctcagccacagaaacaccaggaacctgacggcctttctcagcaaa
gcgtcggacctactgtgctttcctgtgaagcacgtgtacacgaccagtgggaaaagggtg
gactctctgaaggctctgctgcgaagcccctctgtgctggtgtgcgccggtctcgagccc
ttcagaccactagtgatggaagatatcagaagaaaaggaagtgaaccttcatctgggcag
acttcaaggaacaaaagtgggagctgggggcccaaggccaaacagagtgtgatccacgca
cggtccaggctggagaacaggccacggcagttctccttgatgtcggagaggtcggggcac
agcgacccctcggtgtgcccgcatcgtgcctgcatgtgccctgcccccgacaggcaccct
ctgaacactcctgcccagctcagccccttggtgacaggtgaagacatcgagaagaatgtg
agcatgaatgaggatggcagcctatctgtagagatgaaagtccgcttccacctgctgggg
gaggacccgcttctgtggtccaggaggctcgggagggccagcacccacaccgtgactagt
ggggagggccccgacgctggggaggtggatctgcttggctgtgtgtggaagggccactct
ggggacccctcagagcctggggcacagggactggggccctgcgaggcgggaggggtggga
gcctttgaccaaggccagcggcagcaggggtctagatacgagatctggatgaaccccctg
tacatctcccagggagagtggtcagcctgtaggtggaggtctgggctgacccagaactcc
cactccagggcccctcggagccaaagggtcgccagcaggaaaagagggagcaaggacagg
gccagccctgcctccagcgacacaccccctggaggctctgagctaaactcctcctgctgc
tctgggtccctggaggatcctgtggccagctgtggcccacatctggcctcgggggctggt
gaaggcaaaggcaagggagcagcactgggctgcagggaccatgatggctgcctgaaaccc
aggacccgcggcctgacagatgctcttcctgactcctctgcaagcgccaggtctcatgag
gagtgcagcaaaagggacaagctgtcccagggccgccccagcaagactccccatggggcc
acccagcagggagttccgggttctcccactgtaagcccctcgtctatagtgaacaaggac
ccacaggcagaggagtttggacagggagcagggcacccccaggccataaataggtctggg
gtgaggccaccctcgactcggggcccggctgcttctggggatgatgcgggaggctacacc
ccaccttctgcctgtgcctcagccctgggcaggagcagaaagcaggagagcagagccagc
accctgtgctcagccggcagttctgtccccagccaacgggcccagagggcctgccccagg
cagcaccatagccctaaggacatccactgcccgctcgactcgtctgtgtcccggccaatg
ccggggctgtccagcagagacagggcccacccacacggcccctcacccagcctttctgaa
agcccacagggcacctggaaccaggcctcctgggacccagggccacccttctcggtctct
ctttattcccaggacacacgcaggctaagcagcatccccattacccctgggagcaattct
gactgtgtttccaatttctatctccccgattctccctctgctgagactgaagggggccct
gagttcaggccatgctcagtggctctcacaccttcaaacacatctggccctttcagtgcc
ccagctgatggcctgggtgaaaagactggggatgacagattccagccttcctggcccttg
gtccagccagctgggtggcctgagggagggaggctgggagcacaatggggcagctgctgt
tcacacctgggcacatccctggctcgcggagcctcctgtgggacgatacagacgatacca
gccccacagccgcagggcagccaggggccctcctccaaggcctgctgggtgtgcagcagg
tactgtcccacgccccccaggacacggcccttgggcaagaggcatccttcaggcagccgc
agcgagggcgaccgcagcgctgatgggaagcctagtggggagcaggtgggggaggaaaag
ttggatgcgtggcatccgcggccccctggctttcagggagcagcctcggggagagcagtc
agagctgtgagaaggggcagccctcgcagcggtccccagctcaggagaatggtccagggg
aagctctcaggcagaggaggaggcctggaggagccagaggaaggtggcagtgagctgctg
ggagctctgccccgagcctccccggaagccgtggtccgtgagtggctgagcaacatccca
gaggagcccatcaaacacgagctggaggacaaaggcgaggatgtggccgggcatggcctg
gaaggcccccaagaggaccctgtggacaaacattccccagacagtctggaaagatcagtt
tgggccggacaactgccccaggaacaggcggccagtgaggaagcagaaccagataaagcc
tttccagtggctagcagtgctagtcccaagtcaggagagggtctgccttgccgtggggta
tcagaaacccctacggaggctggaacaggcaaaggagtggctgtggacagtgggaggggc
cagcgcgtgctgcccagcagggtctccacctccttacagatcatgaaggcgctgatgggg
tcccggccgggccggcccagcagtctgcctgaagtgtcccactcagcgggcaggaggctc
agccactcggcccaggccctcatcacctgtctcgccaggctccacttctttgatgatgat
gatcttgggtctcccactagcaaagtgaggttcacagactcccctcggtaccaggagctc
ctaagtaccttccaggccctgtggccagggagtggcttcaggaacactgagctggaattg
gacctccgggagctcggctggcgccaggccctcccggcccttgggccccatgttgccact
gaggacttcaggcccacgtcctcctctggggtggatgtcggcagtggttctggaggctcg
ggggagggcagcggaccctgcaccgtggactgcagcttggtgtccgagaagatggagctg
cccttaagcatctcctgccaggggcctgattccagaactttgggggacccagaagttctg
ggaaaccaacagctgagtagttatgaggctgagggtgctgccagtgaggacggcgcagaa
aaaaatggcagggagcagacgctggggggtgacccagaccaaggagataaagacacaatg
caggaagagagggtacaattggaggaaataaaagaagaaaaagaaagagcagaactacaa
gtagagggtgtcagagggtttccggaagaggaaggaatcatggaacgaggattgtcaggg
gtaggctctcaggatggggctggtgtctgggaaaataagagcctgcatgaagaggagcca
ggagaccccactgctgttgccatgcagagctcttgggagaggagagggagcccgccagag
ccccccagaagcctcagcgagaggtacctggatgccagtgggagtcaaagtggccccaaa
gctgagccccctttggagaagttgctcggagcagctgagactggctgtgggcaaaccctg
gacaagatcacccagggggctggtgagaggggcacttgcaagggccacagggggtctctg
atctcggaccctgtgtgggtgtccaagttgttgaagaagatggagaaggccttcatggac
cacctcgccactgccacggccgagctctgcacccgctggggcctgcagggcgaccacctg
ctggaccagatggtggccgagctgcagcgggatgtgggccagcggctccaggacagtgtg
gagaaggagcttctcaaggtccagagctgggcagggggcacgggcacggggctgcccagg
gaagccctccactgggaggcgtccctgcagaccgagcagcgcaggcggcgcctccaggcc
ctgcgtaacctctcgcccttctccgagcagacgcgaggccgggggcccccctccttctcc
ctggaggacctgccgatcttcagaggagccctggggacccaacttggggtagaggccaag
ggggaggagttctgtccctgcgaggcctgcgtgaggaagaaaatggttcccgcatcccca
gtggatgctgtggggtcagccagcgcgcccatcagaaaggccttcgatctgcaacacatt
ctgcagaagaagaaaggagggtgtgctgatggagagacagcggaggtggcccccgctgtg
gagagggaggtggagccccttcacagcgacccctcaaggacaagcactgtccggggagct
gatggagaccctgagctgggatcaggccagggccccagagcggaggagggggaccagacc
tttggcagggatgaagacccctgggggacagaggaggaggggggtgctcaggagaaagag
aggaaaacagagccctgtgtaggcagcgacccctgggaggggctggggaggggggagcag
ggcatgggtggtgaggaaggagacctggaggcgggctgtagggctgaggacactggggag
gctcatggcctggggggaggtggcctgggtccatgcagacaagatgctggtgctgaaaca
acagaggccctggaggctgcaaggcaggagcggtcagaggcaggaggaggacacggaggt
gacgaagaagggggccttcaggttggcctgggatgtggccagtcccgtgaggcttctgga
gacaggagcccaaccccaggggcagatcccccccagcagcggtcaggccccgggtcaggc
ctctcttccttcagcacgtcctctctggggagctgctctctgctctctcagaaaggctcc
gaagatgagccatgggacagatgcatgaggagcactgaagaccaggccatggacatccct
gatccagagagaaaagtcacaggcatgtacccagaaaccaacgcttctgagcaagaagga
gatccgtcaggcaccagaactccagagcaagggacagaggaaggtctgagtccagagcag
agcaaagaggaaggtctggctccagagcaggagggaggggagggcgcagctccagagcag
gaggcagaggaagcatcctacacgccgcagcggctgtacaggaaggcatggctgctgctg
aggccgcggctgaagcccatggacaggacccaggtgtcccggtggcggctgggccacttc
tttcaaagcactgcgcatctccccagagtggaccccactgcctttccgttcacttccgtc
actgtcacagatatcattaccttgcatgcagacctgactgagaccctcacaaaaaagcca
tggatggccatggtgggcttcaggctgcccaagatgccaacaggttatacactgacgaga
cggctgagcagttccgacacgccggcatctagctctgtgatcccaaagtgctttgcgccc
aagcccttcctgggaccctgggtttctgccccccagcaggagcagaggaaaatgccgccc
gaggatgggtctaggtactgcctcatgaatttcatgtggctgagcatccactgcgtggat
gtgagtttctgctctattccagccgatgacgtcagcacatttgggaccatcagggctcac
acctacagccccaggcctccattccaggaggcttccctgaagccttcggaatctcaggaa
tccccccaaaatgccgcagaggcagcaattctggagtccactcaggaaggacctcatgtc
cttgttgtctccctaaagccctcccaggggtga
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