Bubalus bubalis (water buffalo): 102409956
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Entry
102409956 CDS
T05912
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04514
Cell adhesion molecule (CAM) interaction
bbub04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102409956 (LRRC4B)
04517 IgSF CAM signaling
102409956 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102409956 (LRRC4B)
Cell adhesion molecules [BR:
bbub04515
]
Immunoglobulin superfamily
NGL family
102409956 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
DUF7617
Ig_MYOM1
Motif
Other DBs
NCBI-GeneID:
102409956
NCBI-ProteinID:
XP_025125820
LinkDB
All DBs
Position
18:complement(56114113..56157935)
Genome browser
AA seq
715 aa
AA seq
DB search
MARARGSLCPPLPPGRMSWPHGALLFLWLFSPPLGAGGGGMAVTSAAGGGAPPATSCPAA
CSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKHLRHLEILQLSKN
LVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNR
VPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNR
LDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPL
HRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFT
CYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGT
LNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGSAGSAGGGGGGGPGGGPG
GGGGGYTYFTTVTVETLETQPGEEALQPRGTEKEPPGPTTDGVWGGGRPGEGAGQASSST
TAPAPRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYK
LRRQHQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGGGVGGDSHLALPALERD
HLNHHHYVAAAFKAHYSSNPSGGGCGGKGPPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgcccgcggctccctgtgccccccactgccgcccggtaggatgtcctggccc
catggggccctgctgttcctctggctcttctccccgcccctgggggctggcgggggcggc
atggccgtgacatccgctgccggagggggcgccccgccggccacctcctgccccgcggcc
tgctcctgcagcaaccaggccagtcgggtgatctgcaccaggagagagctggccgaagtc
ccggccagcatccctgtcaacacgcggtacctgaacctgcaggagaacggcatccaggtg
atccggacggacacgttcaagcaccttcggcacctggagatcctacagctgagcaagaac
ctggttcgcaagatcgaggtgggcgccttcaacgggctgcccagcctcaacaccctggaa
ctgttcgacaaccggctgacgacggtgcccacgcaggccttcgagtacctgtccaagctg
cgtgagctctggctgcggaacaaccccatcgagagcatcccgtcatacgccttcaaccgc
gtgccctcgctccgccgcctcgacctgggcgagctcaagcggctggagtacatctcggag
gcggccttcgagggcctggtgaacctgcgctacctcaacctgggcatgtgcaacctcaag
gacatccccaacctgacggccctggtgcgcctggaggagctggagctgtctggcaaccgg
ctggaccttatccgcccgggctccttccagggcctgaccagcctgcgcaagctgtggctg
atgcacgcccaggtggccactatcgagcgcaacgccttcgacgacctcaagtcgctggag
gagctcaacctgtctcacaacaacctgatgtcgctgccccacgacctcttcacgcccctg
caccgcctggagcgcgtccacctcaaccacaacccctggcactgcaactgcgacgtgctg
tggctcagctggtggctcaaggagacggtgcccagcaacacgacgtgctgcgcgcgctgc
cacgcacccgccggcctcaaagggcgctacatcggcgagctggaccagtcgcacttcacc
tgctacgcgccagtcatcgtggagccgcccacggacctcaacgtcaccgagggcatggcc
gccgagctcaagtgccgcacgggcacgtccatgacctccgtcaactggctgacgcccaac
ggcaccctcatgacccacggctcgtaccgcgtgcgcatctccgttctccacgacggcacg
ctcaacttcaccaacgtcactgtgcaggacacgggccagtacacctgcatggtgacgaac
tcggccggcaacaccacggcctcggccacactcaacgtctcggccgtggaccccgtggcg
gctggaagtgccggcagcgcgggcggcggcggtgggggcggccccgggggcggccctgga
ggcgggggcggcggctacacctacttcaccactgtgacggtggagaccctggaaacgcag
cccggagaggaggctctgcagccgcgcgggaccgagaaggagccgccggggcccacgaca
gacggcgtctggggcgggggccggcccggggagggggcaggccaggcctcctcgtccacc
acggcgcccgccccgcgctcctcgaggcccacggagaaggcgttcaccgtgcccatcacg
gacgtgacggagaacgccctcaaggacctggatgacgtcatgaagaccaccaagatcatc
atcggctgcttcgtggccatcacgttcatggccgccgtgatgctcgtggccttctacaag
ctgcgcaggcagcaccagctgcacaagcaccacgggcccacgcgcacggtggagatcatc
aacgtggaggacgagctgcccgccgcctccgccgtgtccgtggccgccgccgccgccgtg
gcgggcgggggcggcgtgggcggggacagccacctggccctgcccgcgctggagcgcgac
cacctcaaccaccaccactacgtggcggccgcctttaaggcgcactacagcagcaacccc
agcggcgggggttgcgggggcaagggcccgcccggcctcaactccatccacgaacctctg
ctcttcaagagtggctccaaggagaacgtgcaagagacgcagatctga
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integrated database retrieval system
