Bubalus bubalis (water buffalo): 102410202
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Entry
102410202 CDS
T05912
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04360
Axon guidance
bbub04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102410202 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102410202 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102410202 (L1CAM)
04090 CD molecules [BR:
bbub04090
]
102410202 (L1CAM)
04091 Lectins [BR:
bbub04091
]
102410202 (L1CAM)
Cell adhesion molecules [BR:
bbub04515
]
Immunoglobulin superfamily
L1 family
102410202 (L1CAM)
CD molecules [BR:
bbub04090
]
Proteins
102410202 (L1CAM)
Lectins [BR:
bbub04091
]
I-type lectins (Siglecs)
102410202 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Ig_5
BiPBP_C
Fndc10
Motif
Other DBs
NCBI-GeneID:
102410202
NCBI-ProteinID:
XP_025131867
LinkDB
All DBs
Position
X:104959784..104983242
Genome browser
AA seq
1257 aa
AA seq
DB search
MAVALWYLWPLLLCSPCVLIQIPEEYEGHHVMEPPIITEQSPRRVVVFPTDDVSLKCEAS
GKPEVQFRWTRDGILFKPREELGMIVNQVPHSGSFSITGNSSNFAQSFQGTYRCFASNKL
GTAMSHEIQLMAEGTPKWPKETVKPVEVEEGESVILPCHPPPSAEPLRIYWMNSKILHIK
QDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMMDRKP
HLLFPTNSSSHLVALQGQPLILECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLL
NVGEEDDGEYRCLAENSLGSDRHAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRP
QPEVTWRINGIPVEELGKDQKYRIHHGALVLSNLQPSDTMVTQCEARNRHGLLLANAYIY
VVELPAKILTPDNETYMAVQGSTAYLLCKAFGAPVPSVQWLDREGKTVLQDERFFPYTNG
TLGIRDLQANDTGHYFCQAANDQSNVTIVANLQVKDATRIMQGPRSAIEKRGSRVMFTCQ
ASFDPSLQHSTTWRRDALDLQELGDSDKYFIEDERLVIHSLDYSDQGNYSCVASTKLDVV
ESRAELLVVGSPGPVPQLELSDHHLLKQSQVRLSWSPADDHNAPIEKYDIEFEDKEMAPE
KWYSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPDSETVVTPEAAPEKNPVD
VKGEGNETNNMVITWKPLRWMDWNAPQVQYRVQWRPQKMQGAWQEQIVSDPFLVVSNTST
FVPYEIKVQTVNSQGKGPEPQITIGYSGEDYPQASPLLEPVKALNSSTVLVRWQSVDPAQ
VKGHLRGYNVTYWWEGSQRKHNKRHVHKGHVVVPANATSAILGGLRPYSSYRVEVQAFNG
RGLGPASGMTFNTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYVLSYQPLND
GSKEQLSFDLPDPELRTHNLTNLSPRLRYRFQLQATTREGPGEAIVREGGTMALSGMPDF
GNISAMAGENYSVVSWVPKEGQCNFGFQIWFKALGDEKLVAHLPPQYVSYNQSSYTQWDL
QPDTDYEIQLLKEQVLLHQMAVKTNGTGRVRLPPAGFATEGWFIGFISAIVVLLLVLLIL
CFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDIK
PLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEVAGGNDSSGATSPVNPAGTLE
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggcgctgtggtacttgtggcctctcctcctctgcagcccttgcgtgctcatc
cagatccctgaggaatatgaaggacaccatgtgatggaaccccccatcatcacggagcag
tctccccggcgtgtggtcgtcttccccacagatgacgtcagcctcaagtgtgaggccagc
ggcaaacccgaagtgcagtttcgctggactcgggatggcatcctcttcaaacccagagag
gaactgggcatgatcgtgaaccaggtgccccattctggctccttcagcatcacgggcaac
agcagcaacttcgcccagagcttccagggcacctatcgctgctttgccagcaacaagctg
ggcaccgccatgtcccacgagatccagctcatggctgagggtacccccaagtggccaaag
gagacagtgaaacctgttgaggtcgaggaaggggagtcggtgattctcccttgccacccg
ccccccagtgcagagccactccggatctactggatgaacagcaagatcttgcacatcaaa
caggatgagcgggtgaccatgggccagaatggcaacctttactttgctaatgtgctcacc
tcggacaaccactcagactacatctgtcacgcccacttccctggcacccgaaccatcatt
caaaaggaacccattgacctccgggtcaaagccaccaacagcatgatggacagaaaacca
cacctgctcttccccaccaattccagcagccacctggtggccctgcaggggcagcccttg
atcttggagtgcatagctgagggcttccccacgcccaccatcaagtggctgcgcccaagc
ggccccatgccagccgaccgggtcacctaccagaaccacaacaagactctgcagttgctg
aacgtgggtgaggaggacgacggcgagtaccgctgcctggctgagaactcgctgggcagc
gaccgccacgcctactacgtcaccgtggaggctgcaccatactggctacacaagccccag
agccatctgtacgggccaggggagactgcccgcctagactgtcaagtgcagggcaggccc
caaccggaggtcacctggagaatcaacgggatccctgtggaggagctgggcaaggaccag
aagtaccggatccaccatggagccctggtcctgagcaatctgcagcccagtgacactatg
gtgacccagtgtgaggcccgcaaccgccacgggctcctgctggccaatgcctacatctat
gttgtggagctgccagccaagatcctgaccccagacaatgagacatacatggcagtccag
ggcagcaccgcctaccttctgtgcaaggccttcggagcccctgtgcccagcgtccagtgg
ctggacagggaaggaaagacagtgctgcaggacgagcgcttcttcccctacaccaacggg
accctgggcatccgagacctccaggccaatgacactgggcactacttctgccaggctgcc
aacgaccaaagcaacgtgaccattgtggctaacctgcaggtcaaagatgccactcggatc
atgcaggggccccgcagtgcaatcgagaagagaggctcccgagtgatgttcacatgccag
gcctcctttgacccctccctgcagcacagcaccacctggcgcagggatgctctcgacctg
caggagctgggggacagtgacaagtacttcatagaagacgagcgcttggtcatccacagc
ctggactacagcgaccagggcaactacagctgcgtggccagcaccaagctggacgtggtg
gaaagccgggcagagctgctggtggttgggagccccggacctgtgccccagctggagctg
tctgatcaccacctgctgaagcagagccaggtgcgcctgtcttggagcccggctgatgac
cataacgcccccattgagaagtatgacattgaatttgaggacaaggagatggcacccgag
aagtggtacagcctgggcaaggtgcccggaaaccagacctccaccaccctcaagctgtcg
ccttatgtccactatacctttcgagtcactgccatcaacaaatatggccctggggagccc
agcccggactcggagactgtggtcacaccggaggcagccccagagaagaaccccgtggac
gtgaagggggaaggaaatgagaccaacaacatggtcatcacttggaagccgctgcggtgg
atggactggaatgccccccaggttcagtatcgagtgcagtggcgcccccagaagatgcag
ggggcctggcaggaacagatcgtcagtgaccccttcctggtggtgtccaatacgtctacc
tttgtgccgtatgagatcaaagtccagaccgtcaacagccagggcaagggccctgagccc
cagatcaccatcggctactctggagaggactacccccaggcaagccctctgctggaaccc
gtcaaggccctcaattcaagcactgtgctggtcaggtggcagtctgtggacccagcccag
gtcaaaggccacctccggggatacaatgtgacgtactggtgggaaggcagtcagaggaag
cacaacaagaggcacgtccacaaaggccacgtggtggtgccagccaatgccaccagcgcc
atcctgggaggcctgcggccctacagctcctaccgggtggaggttcaggcctttaacggg
aggggactggggcccgccagtgggatgaccttcaacacccctgagggagtgcccggacac
cctgaggcattgcacctggagtgccagtcggataccagcctgctgctgcactggcagcct
ccgctcagccataatggtgtgctcacgggctacgtgctctcctaccaacctttgaatgac
gggagcaaggagcagttgtcctttgacctcccggaccctgagctgcggacacacaacctg
accaacctcagcccccgcctgcggtaccgattccagctgcaggccaccacaagggagggc
ccgggggaggcgatcgtacgggaaggaggcaccatggccttgtccgggatgccggacttt
ggcaacatctccgccatggctggcgagaattacagtgtggtctcctgggtccccaaagag
ggccagtgcaacttcgggttccagatctggttcaaagccctgggggacgagaagctggtg
gctcatctcccgccgcagtatgtcagctacaaccagagctcctacacacagtgggacctg
cagcctgacaccgactatgagatccagctgctcaaggagcaggtgctcctgcaccagatg
gcagtgaagaccaacggcaccggccgagtgaggctgcctcccgctggctttgccactgag
ggctggttcatcggcttcatcagtgctatcgttgtcctgcttctcgtcttactcatcctg
tgcttcattaagcgcagcaagggtggcaagtactcggtgaaggacaaggaggacacccag
gtggactcggaggcccggcccatgaaggacgaaaccttcggcgagtacaggtccctggag
agtgacaacgaggagaaggcctttggtagcagccagccatcactcaacggagacatcaag
cccctgggcagcgatgacagcctggcagactatggaggcagcgtggacgtccagttcaat
gaggatggctccttcatcggccagtacagtggcaagaaggagaaggaggtggcagggggc
aatgacagctccggggccacatcccccgtcaaccccgctgggaccctggagtag
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integrated database retrieval system
